|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | H | Y | L | V | I | T | A | L | G | A | D | R | P | G | I | V | N | T | I | T | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | V | S | S | C | G | C | N | I | E | D | S | R | L | A | M | L | G | E | E | F | T | F | I | M | L | L | S | G | S | W | N | A | I | T | L | I | E | S | T | L | P |
Query Conservation |   |
|   |   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |   | . | . | . |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
V | S | H | M | G | E | F | L | V | K | G | P | E | A | V | S | F | I | D | F | L | I | T | N | D | F | S | S | L | P | D | G | K | A | I | Y | S | V | M | C | N | E | N | G | G | I | I | D | D | L | V | V | Y | K | V | S | P | D | E | . |
. |
. |
A | L | M | V | V | N | A | A | N | I | E | K | D | F | N | W | I | K |
Template Known Secondary structure |   |
| T | T | S |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  | B | S | S |
|
| T | T |
|
| T | T |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |  | . | . | . |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | G | A | E | L | D | L | L | I | V | M | K | R | T | T | A | R | P | R | P | P | M | P | A | S | V | W | V | Q | V | D | V | A | D | S | P | H | L | I | E | R | F | T | . |
. |
. |
. |
. |
. |
. |
A | L | F | D | A | H | H | M | N | I | A | E | L | V | S | R | T | Q | P | A | E | N | E | R | A | A | Q | L | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|   |   |
|
| . | . | . | . | . | . | . |   |   |
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|
Template Sequence |   |
S | H | S | K | N | F | D | V | E | V | S | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
I | S | D | T | T | A | L | I | A | F | Q | G | P | K | A | Q | E | T | L | Q | E | L | V | E | D | G | L | E | E | I | A | Y | Y | S | F | R | K | S | I | V | A | G | V | E | T | L | V | S | R | T | G | Y | T | G | E | D | G | F | E |
Template Known Secondary structure |   |
T | T |
| T | T | S | S |
|  |  |  |  | . | . | . | . | . | . | . | . | . |
| G | G | G |  |  |  |  |  |  |  | S | T | T |  |  |  |  |  | G | G | G | B | S | S |
| S | T | T | S |
| T | T | B |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S |
|
| S | S | S | S | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | I | T | A | H | S | P | A | S | A | D | A | A | N | I | E | Q | A | F | K | A | L | C | T | E | L | N | A | Q |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
L | M | L | . |
. |
. |
. |
. |
E | A | K | N | A | P | K | V | W | D | A | L | M | N | L | L | R | K | I | D | G | R |
Template Known Secondary structure |   |
 |  |  | . | . | . | . | . |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |
Template Predicted Secondary structure |   |
 |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
196 | . | . | |
|
|
|
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |