 |
Job Description | P0A9I3 | Confidence | 97.27% | Date | Thu Jan 5 11:10:20 GMT 2012 |
Rank | 29 | Aligned Residues | 123 |
% Identity | 13% | Template | c2f1fA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:acetolactate synthase isozyme iii small subunit; |
PDBTitle: crystal structure of the regulatory subunit of2 acetohydroxyacid synthase isozyme iii from e. coli
|
Resolution | 1.75 Å |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | T | A | L | G | A | D | R | P | G | I | V | N | T | I | T | R | H | V | S | S | C | G | C | N | I | E | D | S | R | L | A | M | L | . |
. |
G | E | E | F | T | F | I | M | L | L | S | G | S | W | N | A | I | T | L | I | E | S | T | L | P | L | K | G | A | E | L | D | L | L | I | V | M | K | R | T | T | A | R |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|
|   |
|
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |
|
|   |
|
|
|   |
|
| . | . | . | . | . |
|
|
|   |   |
|   |   |
|   |   |
Template Sequence |   |
I | L | S | V | L | L | E | N | E | S | G | A | L | S | R | V | I | G | L | F | S | Q | R | G | Y | N | I | E | S | L | T | V | A | P | T | D | D | P | T | L | S | R | M | T | I | Q | T | V | G | D | E | K | V | L | E | Q | I | E | K | Q | L | H | K | L | . |
. |
. |
. |
. |
V | D | V | L | R | V | S | E | L | G | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
| S |  |  |  |  |  |  |
| S |
| S | S |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | . | . | T | T |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | P | P | M | P | A | S | V | W | V | Q | V | D | V | A | D | S | P | H | L | I | E | R | F | T | A | L | F | D | A | H | H | M | N | I | A | E | L | V | S | R | T | Q | P | A | E | N | E | R | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |
|
|
|
|   |   |   | . | . |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |
Template Sequence |   |
G | A | H | V | E | R | E | I | M | L | V | K | I | Q | A | S | . |
. |
G | Y | G | R | D | E | V | K | R | N | T | E | I | F | R | G | Q | I | I | D | V | T | P | S | L | Y | T | V | Q | L | A | G | T | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|