Job Description P0A9I3 Confidence 22.47% Date Thu Jan 5 11:10:20 GMT 2012 Rank 74 Aligned Residues 152 % Identity 14% Template c1x31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.																.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	H	Y	L	V	I	T	A	L	G	A	D	R	P	G	I	V	N	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	H	V	S	S	C	G	C	N	I	E	D	S	R	L	A	M	L	G	E	E	F	T	F	I	M	L	L	S	G	S	W	N	A	I	T	L	I	E	S	T	L	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																																												.	.	.
Template Sequence		A	S	T	L	G	K	I	E	I	R	G	K	D	A	A	E	F	L	N	R	M	Y	T	N	G	Y	T	K	L	K	V	G	M	G	R	Y	G	V	M	C	K	A	D	G	M	I	F	D	D	G	V	T	L	R	L	A	E	D	.	.	.	R	F	L	M	H	T	T	T	G	G	A	A	D	V	L	D	W	L	E
Template Known Secondary structure			T	T	S							S	T	T									B	S	S			S	S			T	T	B									T	T	S													T	T	.	.	.								G	G	G
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.				.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
		70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.											.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure								.	.																																						.	.	.	.	.	.	.	.	.	.												.
Query SS confidence								.	.																																						.	.	.	.	.	.	.	.	.	.												.
Query Sequence		L	K	G	A	E	L	.	.	D	L	L	I	V	M	K	R	T	T	A	R	P	R	P	P	M	P	A	S	V	W	V	Q	V	D	V	A	D	S	P	H	L	I	E	R	F	.	.	.	.	.	.	.	.	.	.	T	A	L	F	D	A	H	H	M	N	I	.	A	E	L	V	S	R	T	Q	P	A	E	N	E
Query Conservation								.	.																																						.	.	.	.	.	.	.	.	.	.												.
Alig confidence								.	.													.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.												.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		E	W	L	Q	T	E	W	P	E	L	D	V	T	C	T	S	V	T	E	Q	.	.	.	.	.	.	.	L	A	T	V	A	V	V	G	P	R	S	R	D	V	I	A	K	L	A	S	S	L	D	V	S	N	D	A	F	K	F	M	A	F	Q	D	V	T	L	D	S	G	I	E	A	R	I	S	R	I	S	F	S
Template Known Secondary structure							T		T	T	S								T	T	T	.	.	.	.	.	.	.								S	T	T									S	T	T				S	T	T	T	S		T	T	B							T	T	S										S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.								.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	Q	L	H	I	Q	I	T	A	H	S	P	A	S	A	D	A	A	N	I	E	Q	A	F	K	A	L	C	T	E	L	N	A
Query Conservation
Alig confidence											.	.	.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		G	E	L	A	F	E	I	A	I	.	.	.	.	.	P	A	W	H	G	L	Q	V	W	E	D	V	Y	A	A	G	Q	E	F	N	I
Template Known Secondary structure		S	S								.	.	.	.	.		G	G	G												T	G	G	G	T
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		778	.	780	.	.	.	.	.	.						.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions