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Job DescriptionP11071
Confidence100.00%DateThu Jan 5 11:32:28 GMT 2012
Rank1Aligned Residues559
% Identity99%Templatec3epsB_
PDB info PDB header:transferase, hydrolaseChain: B: PDB Molecule:isocitrate dehydrogenase kinase/phosphatase; PDBTitle: the crystal structure of isocitrate dehydrogenase kinase/phosphatase2 from e. coli
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  PRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLR
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Template Sequence  PRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAEFLLR
Template Known Secondary structure 
TTT
TSSSTT
TT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLP
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Template Sequence  VKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLP
Template Known Secondary structure  GGG
TTTTT
S

TTTS
SS
SS



SS

SS





SSTTTSGGG

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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCLT
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Template Sequence  LRLHWQNKSRDIHYIIRHLTETLGPENLSKSHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCLT
Template Known Secondary structure 

S
BS
TS

SS
TT
TT


SSS



B
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  TTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGM
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Template Sequence  TTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGM
Template Known Secondary structure 
T
TTS


B


SSTTS
TTS
TT




B
SSS

S
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  VMLVFTLPGFDRVFKVIKDRFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKI
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Template Sequence  VMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKI
Template Known Secondary structure  S
TT
S
SS

SS



TS

TTSB

GGGB
SSTT
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  TDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICY
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Template Sequence  TDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICY
Template Known Secondary structure 
SS

GGG

TTT
SS

GGG
TTS


GGG
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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   482.......490.........500.........510.........520.........530.........540.........550.........560.
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Query Sequence  MTEVNFRDIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVY
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Template Sequence  MTEVNFRDIP. . . . . . . . . . . . . . YSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVY
Template Known Secondary structure  GGG




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TT
GGGSTSSTT

GGG
TTT





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   482.......490. ........500.........510.........520.........530.........540.......
 
   562.......570....
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Query Sequence  AYRRRQRFSVRYG
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Template Conservation 

    

     
Template Sequence  AYRRRQRFSVRYG
Template Known Secondary structure  SS
TTSST
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   562.......570....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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