Job Description P11071 Confidence 18.73% Date Thu Jan 5 11:32:28 GMT 2012 Rank 34 Aligned Residues 115 % Identity 14% Template c2hjvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase dbpa; PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein Resolution 1.95 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	E	W	L	R	E	I	L	P	G	K	T	T	A	E	L	Y	M	A	I	G	C	Q	K	H	A	K	T	E	S	Y	R	E	Y	L	V	Y	L	Q	G	C	N	E	Q	F	I	E	A	P	G	I	R	G	M	V	M	L	V	F	T	L	P	G	F	D	R	V	F	K	V	I	K	D	R	F	A	P	Q
Query Conservation
Alig confidence																.	.	.	.																																									.	.	.										.	.	.	.	.
Template Conservation																.	.	.	.																																									.	.	.										.	.	.	.	.
Template Sequence		E	H	V	N	Q	L	T	D	E	L	D	D	L	G	.	.	.	.	Y	P	C	D	K	I	H	G	G	M	I	Q	E	D	R	F	D	V	M	N	E	F	K	R	G	E	Y	R	Y	L	V	A	T	D	V	A	A	R	G	I	.	.	.	D	I	E	N	I	S	L	V	I	.	.	.	.	.	N	Y	D	L	P
Template Known Secondary structure														T	T	.	.	.	.								T	T	S															T	S		S						T	T	T	T	T	T	S	.	.	.					B	S				.	.	.	.	.		S	S
Template Predicted Secondary structure																.	.	.	.																																									.	.	.										.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.						.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	M	S	A	A	H	V	R	A	C	Y	Q	L	V	K	E	H	D	R	V	G	R	M	A	D	T	Q	E	F	E	N	F	V	L	E	K	R	H	I	S	P	A	L	M	E	L	L	L	Q	E	A	A	E	K	I	T	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																									.	.	.
Template Conservation							.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		L	E	K	E	S	.	.	.	.	.	.	.	.	Y	V	H	R	T	G	R	T	G	R	A	G	N	K	G	K	A	I	S	F	V	T	A	F	.	.	.	E	K	R	F	L	A	D	I	E	E	Y	I	G	F	E	I	Q	K
Template Known Secondary structure		S	S				.	.	.	.	.	.	.	.						T	T	B		B	T	T	B										T	T	.	.	.													T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		319	320	.	.	.									.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions