Job Description P11071 Confidence 12.32% Date Thu Jan 5 11:32:28 GMT 2012 Rank 67 Aligned Residues 137 % Identity 13% Template c1tqmA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a. fulgidus rio2 serine protein kinase bound to2 amppnp Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		I	E	A	P	G	I	R	G	M	V	M	L	V	F	T	L	P	G	F	D	R	V	F	K	V	I	K	D	R	F	A	P	Q	K	E	M	.	S	A	A	H	V	R	A	C	Y	Q	L	V	K	E	H	D	R	V	G	R	M	A	D	T	Q	E	F	E	N	F	V	L	E	K	R	H	I	S	P	A	L	M	E
Query Conservation																																						.
Alig confidence																																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	G	E	G	K	E	S	A	V	F	N	C	Y	S	E	K	F	G	E	C	V	V	K	F	H	K	V	K	V	K	E	H	F	S	V	L	A	I	R	S	A	R	N	E	F	R	A	L	Q	K	L	Q	G	L	A	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S									T	T	T																																		T	T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	Q	E	A	A	E	K	I	T	D	L	G	E	Q	I	V	I	R	H	L	Y	I	E	R	R	M	V	P	L	N	I	W	L	E	Q	V	E	G	Q	Q	L	R	D	A	I	E	E	Y	G	N	A	I	R	Q	L	A	A	A	N	I	F	P	G	D	M	L	F	K	N	F	G	V	T	R	H	G	R	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																													.
Template Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																													.
Template Sequence		.	.	.	.	.	.	.	K	V	Y	A	W	E	G	N	A	V	L	M	E	L	I	D	A	K	E	.	.	.	.	.	.	.	.	L	Y	R	V	R	V	E	N	P	D	E	V	L	D	M	I	L	E	E	V	A	K	F	Y	H	R	G	I	V	H	G	D	L	S	Q	Y	N	V	L	V	S	E	E	G	.	I
Template Known Secondary structure		.	.	.	.	.	.	.							T	T												.	.	.	.	.	.	.	.	G	G	G				S																			T	T				S	S			T	T	T					T	T		.
Template Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																																													.
Template SS confidence
									168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	Y	D	Y	D	E	I	C	Y	M	T	E	V	N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	I	I	D	F	P	Q	S	V	E	V	G	E	E	G	W
Template Known Secondary structure							T	T				T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions