Job Description P0A9C3 Confidence 99.86% Date Thu Jan 5 11:09:52 GMT 2012 Rank 18 Aligned Residues 289 % Identity 13% Template c3ty1B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:hypothetical aldose 1-epimerase; PDBTitle: crystal structure of a hypothetical aldose 1-epimerase (kpn_04629)2 from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a3 resolution Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	P	Y	R	L	L	T	L	R	N	N	A	G	M	V	V	T	L	M	D	.	W	G	A	T	L	L	S	A	R	I	P	L	S	D	G	S	V	R	E	A	L	L	G	C	A	S	P	E	C	.	.	.	.	.	.	.	.	.	.	Y	Q	D	Q	A	A	F	L	G	A	S	I	G	R	Y	A	N	R	I
Query Conservation																							.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	G	S	K	I	L	T	I	H	S	K	D	G	L	T	I	T	L	S	P	T	R	G	X	N	L	L	R	I	E	G	F	G	S	R	X	G	W	D	S	P	V	K	E	V	V	N	P	A	F	I	N	L	E	S	R	N	G	L	G	W	L	E	G	F	N	E	X	X	V	R	C	G	Y	E	W	T	G	H
Template Known Secondary structure		G	T	T									T	T	S							G	G	G	T	T								T	T								S			S				G	G	G			T	T					T	G	G	G	G	T				S							S			S	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.
Predicted Secondary structure																																													.	.													.																				.
Query SS confidence																																													.	.													.																				.
Query Sequence		A	N	S	R	Y	T	F	D	G	E	T	V	T	L	S	P	S	Q	G	V	N	Q	L	H	G	G	P	E	G	F	D	K	R	R	W	Q	I	V	N	Q	N	D	R	.	.	Q	V	L	F	A	L	S	S	D	D	G	D	.	Q	G	F	P	G	N	L	G	A	T	V	Q	Y	R	L	T	D	D	N	.	R	I
Query Conservation																																													.	.													.																				.
Alig confidence				.	.	.									.	.	.	.	.	.	.	.	.																						.	.													.																				.
Template Conservation				.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		P	V	.	.	.	T	A	D	G	Q	I	Y	T	.	.	.	.	.	.	.	.	.	L	H	G	K	A	G	N	T	P	A	S	L	V	E	V	E	V	A	D	S	A	P	Y	E	I	R	I	R	G	L	V	K	E	S	T	F	K	K	A	D	L	Q	T	L	T	E	L	R	Y	V	P	G	S	N	S	F	S	L
Template Known Secondary structure				.	.	.			T	T					.	.	.	.	.	.	.	.	.	T	T	B	S	G	G	G	S			S								S	S	T	T														T	T	T													T	T		S
Template Predicted Secondary structure				.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.				.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	Y	R	A	T	V	D	K	P	C	P	V	N	M	T	N	H	V	Y	F	N	L	D	G	E	Q	S	D	V	R	N	H	K	L	Q	I	L	A	D	E	Y	L	P	V	D	E	G	G	I	P	H	D	G	L	K	S	V	A	G	T	S	F	D	F	R	S	A	K	I	I	A	S	E	F	L	A	D	D
Query Conservation
Alig confidence																															.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	D	V	L	T	N	H	A	D	Y	P	H	D	Y	Q	I	I	Y	H	S	N	F	G	T	P	I	L	E	E	.	.	.	G	A	R	F	L	A	P	I	S	S	I	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	D	Y	A	K	S	G	L	K	T	W	Q	T
Template Known Secondary structure									S	S	S														T	T	T		S	T	.	.	.	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	G	G	G	G	S	T	T	T	T	B
Template Predicted Secondary structure																															.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.																						.	.	.	.	.	.	.	260	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure											.	.																															.	.	.
Query SS confidence											.	.																															.	.	.
Query Sequence		D	Q	R	K	V	K	G	Y	D	.	.	H	A	F	L	L	Q	A	K	G	D	G	K	K	V	A	A	H	V	W	S	A	D	E	K	L	Q	L	K	V	Y	.	.	.	T	T	A	P	A	L	Q	F	Y	S	G	N	F	L	G	G	T	P	S	R	G	T	E	P	Y	A	D	W	Q	G	L	A	L	E	S	E
Query Conservation											.	.																															.	.	.
Alig confidence											.	.																															.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	G	P	T	K	D	F	D	E	X	V	F	N	I	Q	P	L	A	D	E	N	H	Q	T	L	A	A	V	V	N	K	A	G	D	K	G	A	S	I	Q	F	D	T	R	Q	L	P	V	L	T	L	W	K	N	T	D	T	V	.	.	.	.	.	.	.	.	.	.	K	Q	G	Y	V	T	G	I	E	P	G
Template Known Secondary structure					S		T	T														T	T	S									S	S	S	S									T	T	T													T	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.											.	.	.	.	330	.	.	.	.	.	.
		312	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		F	L	.	P	D	S	P	N	H	P	E	W	P	Q	P	D	C	F	L	R	P	G	E	E	Y	S	S	L	T	E	Y	Q	F	I	A	E
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		T	S	Y	A	Y	P	V	T	I	E	R	K	Q	K	R	V	K	Q	L	Q	P	G	A	S	A	Q	F	D	L	T	Y	T	L	L	H	D
Template Known Secondary structure		S	S		S	S								T	T							T	T														S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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