 |
Job Description | P0A9C3 | Confidence | 5.92% | Date | Thu Jan 5 11:09:52 GMT 2012 |
Rank | 50 | Aligned Residues | 28 |
% Identity | 39% | Template | c3nttA_ |
PDB info |
PDB header:virus | Chain: A: PDB Molecule:capsid protein; |
PDBTitle: structural insights of adeno-associated virus 5. a gene therapy vector2 for cystic fibrosis
|
Resolution | 3.45 Å |
|
  |   |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | W | Q | G | L | A | L | E | S | E | F | L | P | D | S | P | N | H | P | E | W | P | Q | P | D | C | F | L | R | P | G | E | E | Y | S | S | L | T | E | Y | Q | F |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |   | . | . |
|   |
|
Template Sequence |   |
E | R | S | S | F | F | C | L | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | F | P | S | K | M | L | R | T | G | N | N | F | E | F | T | . |
. |
Y | N | F |
Template Known Secondary structure |   |
T | T |
|
|
|
|
| G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | G | S |
|
|  |  |  |
| T | T |
|
|  |  |  |  | . | . |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  | . | . |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
381 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | |
|
. | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|