Job Description P0A9C3 Confidence 6.36% Date Thu Jan 5 11:09:52 GMT 2012 Rank 44 Aligned Residues 33 % Identity 33% Template c3kieF_ PDB info PDB header:virus Chain: F: PDB Molecule:capsid protein vp1; PDBTitle: crystal structure of adeno-associated virus serotype 3b Resolution 3.00 Å

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		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	E	P	Y	A	D	W	Q	G	L	A	L	E	S	E	F	L	P	D	S	P	N	H	P	E	W	P	Q	P	D	C	F	L	R	P	G	E	E	Y	S	S	L	T	E	Y	Q	F
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		G	S	Q	A	V	G	R	S	S	F	Y	C	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	P	S	Q	M	L	R	T	G	N	N	F	.	.	Q	F	S	Y	T	F
Template Known Secondary structure		T	T				T	T						G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S							T	T	B			.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.														.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions