Job Description P0A9C3 Confidence 100.00% Date Thu Jan 5 11:09:52 GMT 2012 Rank 14 Aligned Residues 276 % Identity 20% Template c3k25B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:slr1438 protein; PDBTitle: crystal structure of slr1438 protein from synechocystis sp. pcc 6803,2 northeast structural genomics consortium target sgr112 Resolution 2.55 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																		.											.																																							.	.
Query SS confidence																		.											.																																							.	.
Query Sequence		A	L	A	P	D	G	Q	P	Y	R	L	L	T	L	R	N	.	N	A	G	M	V	V	T	L	M	D	.	W	G	A	T	L	L	S	A	R	I	P	L	S	D	G	S	V	R	E	A	L	L	G	C	A	S	P	E	C	Y	Q	D	Q	A	A	F	L	G	.	.	A	S	I	G	R	Y	A	N	R	I	A	N
Query Conservation																		.											.																																							.	.
Alig confidence											.	.						.											.															.	.	.	.	.	.																			.	.
Template Conservation											.	.																																.	.	.	.	.	.
Template Sequence		S	F	T	P	D	R	P	L	T	.	.	Y	H	L	E	D	D	Q	S	L	A	R	L	S	L	V	P	G	R	G	G	L	V	T	E	W	T	V	Q	G	Q	P	.	.	.	.	.	.	I	L	Y	F	D	R	E	R	F	Q	D	P	S	L	S	V	R	G	G	I	P	I	L	F	P	I	C	G	N	L	P	Q
Template Known Secondary structure											.	.						T	T	T	T							T	T	S	S	S								T	T			.	.	.	.	.	.		B		B						T	S	T	T	S				B	S					B	S		S	S			G	G
Template Predicted Secondary structure											.	.																																.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160
Predicted Secondary structure																																																							.																				.
Query SS confidence																																																							.																				.
Query Sequence		S	R	Y	T	F	D	G	E	T	V	T	L	S	P	S	Q	G	V	N	Q	L	H	G	G	P	E	G	F	D	K	R	R	W	Q	I	V	N	Q	N	D	R	Q	V	L	F	A	L	S	S	D	D	G	D	.	Q	G	F	P	G	N	L	G	A	T	V	Q	Y	R	L	T	D	D	N	.	R	I	S	I	T	Y
Query Conservation																																																							.																				.
Alig confidence																.	.	.	.	.	.	.																																	.																				.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		D	Q	F	N	H	A	G	K	S	Y	R	L	K	Q	.	.	.	.	.	.	.	H	G	F	A	R	D	L	P	W	E	V	I	G	Q	Q	T	Q	D	N	A	R	L	D	L	R	L	S	H	N	D	A	T	L	E	A	F	P	F	A	F	E	L	V	F	S	Y	Q	L	Q	G	H	S	L	R	I	E	Q	R	I
Template Known Secondary structure		G				S	S	S							T	.	.	.	.	.	.	.	T	B	S	T	T	T	S										S	S	S																	S		S												T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	T	V	D	K	P	C	P	V	N	M	T	N	H	V	Y	F	N	L	D	G	E	Q	S	D	V	R	N	H	K	L	Q	I	L	A	D	E	Y	L	P	V	D	E	G	G	I	P	H	D	G	L	K	S	V	A	G	T	S	F	D	F	R	S	A	K	I	I	A	S	E	F	L	A	D	D	D	Q	R	K
Query Conservation
Alig confidence																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		A	N	L	G	D	Q	R	X	P	F	S	L	G	F	H	P	Y	F	F	C	R	.	.	.	.	E	K	L	G	I	T	L	A	I	P	A	N	D	Y	L	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	K	T	G	D	C	H	G	Y	D	G	Q	L	N	L	T	S	P	E	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S															S	.	.	.	.			T	T							B	S					T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T							S				T	T	S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.													.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.
Predicted Secondary structure																																							.	.																																					.
Query SS confidence																																							.	.																																					.
Query Sequence		V	K	G	Y	D	H	A	F	L	L	Q	A	K	G	D	G	K	K	V	A	A	H	V	W	S	A	D	E	K	L	Q	L	K	V	Y	T	T	.	.	A	P	A	L	Q	F	Y	S	G	N	F	L	G	G	T	P	S	R	G	T	E	P	Y	A	D	W	Q	G	L	A	L	E	S	E	F	L	.	P	D	S	P
Query Conservation																																							.	.																																					.
Alig confidence		.	.	.							.	.	.	.	.																								.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation		.	.	.							.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	L	D	L	A	F	T	.	.	.	.	.	Q	I	S	Q	P	R	A	H	F	I	D	P	D	R	N	L	K	I	E	V	S	F	S	E	L	Y	Q	T	L	V	L	W	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	K	D	Y	L	C	L	E	P	W	S	G	P	R	N	A	L
Template Known Secondary structure		.	.	.							.	.	.	.	.		B	S	S	S							T	T	T	T									T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S								S	S		T	T
Template Predicted Secondary structure		.	.	.							.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					206	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.															.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	P	E	W	P	Q	P	D	C	F	L	R	P	G	E	E	Y	S	S	L	T	E	Y	Q	F	I	A	E
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		N	S	.	.	.	G	E	Q	L	A	W	V	E	P	Y	S	S	R	S	A	W	V	N	F	Q	V	S	T	E
Template Known Secondary structure				.	.	.		T	T						T	T
Template Predicted Secondary structure				.	.	.
Template SS confidence
		264	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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