Job Description P0A9C3 Confidence 100.00% Date Thu Jan 5 11:09:52 GMT 2012 Rank 5 Aligned Residues 323 % Identity 34% Template c3imhB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:galactose-1-epimerase; PDBTitle: crystal structure of galactose 1-epimerase from lactobacillus2 acidophilus ncfm Resolution 1.76 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E	T	P	A	L	A	P	D	G	Q	P	Y	R	L	L	T	L	R	N	N	A	G	M	V	V	T	L	M	D	W	G	A	T	L	L	S	A	R	I	P	L	S	D	G	S	V	R	E	A	L	L	G	C	A	S	P	E	C	Y	Q	D	Q	A	A	F	L	G	A	S	I	G	R	Y	A	N	R	I	A
Query Conservation
Alig confidence																																													.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		T	N	F	V	K	Y	E	R	K	D	N	K	D	L	C	E	I	T	L	E	N	D	A	G	M	A	V	K	V	L	N	Y	G	A	T	L	E	K	V	L	L	D	G	.	.	.	.	.	E	N	M	I	L	S	L	N	S	P	E	D	Y	S	K	E	R	N	F	L	G	G	T	V	G	R	I	A	G	R	V	R
Template Known Secondary structure											T	T											S	S	S							T	B	T	T								T	T	.	.	.	.	.				B				S	S	G	G	G	G	G	T	S				T	T					S	B		S			G
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		N	S	R	Y	T	F	D	G	E	T	V	T	L	S	P	S	Q	G	V	N	Q	L	H	G	G	P	E	G	F	D	K	R	R	W	Q	I	.	.	.	V	N	Q	N	D	R	Q	V	L	F	A	L	S	S	D	D	G	D	Q	G	F	P	G	N	L	G	A	T	V	Q	Y	R	L	T	D	D	N	R	I	S	I
Query Conservation																																						.	.	.
Alig confidence																												.										.	.	.
Template Conservation																												.
Template Sequence		A	G	Q	W	K	H	G	N	E	I	H	Q	L	P	L	N	D	G	D	N	H	I	H	G	G	I	.	G	T	D	M	H	V	W	D	F	R	P	S	C	D	S	E	H	A	R	V	D	L	T	L	F	D	P	D	G	N	N	D	Y	P	G	N	L	K	L	H	A	R	Y	E	L	D	N	E	N	N	L	H	Y
Template Known Secondary structure		G	G					T	T									B	T	T	B			T	T	S	S	.		G	G	G	S	B									S	S												T	T	G	G	G			S												T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	R	A	T	V	D	K	P	C	P	V	N	M	T	N	H	V	Y	F	N	L	D	G	E	Q	S	D	V	R	N	H	K	L	Q	I	L	A	D	E	Y	L	P	V	D	E	G	G	I	P	H	D	G	L	K	S	V	A	G	T	S	F	D	F	R	S	A	K	I	I	A	S	E	F	L	A	D	D	D	Q
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		L	L	E	A	V	S	D	K	L	T	I	F	N	P	V	N	H	T	Y	F	N	L	G	E	.	.	.	R	A	E	D	L	N	L	Q	M	N	A	D	Y	Y	L	P	V	D	E	A	G	L	P	D	R	G	M	A	E	V	A	G	T	A	F	D	F	R	K	T	K	R	I	G	D	A	L	N	S	D	D	S	Q
Template Known Secondary structure								S	S	S				B									T	T	S	.	.	.		G	G	G													B		T	T	S	S	B	S	S						T	T	S	T	T			S	S									T	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
			239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	K	V	K	G	Y	D	H	A	F	L	L	Q	A	K	G	D	G	K	K	V	A	A	H	V	W	S	A	D	E	K	L	Q	L	K	V	Y	T	T	A	P	A	L	Q	F	Y	S	G	N	F	L	G	G	T	P	S	R	G	T	E	P	Y	A	D	W	Q	G	L	A	L	E	S	E	F	L	P	D	S	P
Query Conservation		.
Alig confidence		.																	.	.	.	.	.	.																																						.	.
Template Conservation																			.	.	.	.	.	.																																						.	.
Template Sequence		I	K	L	R	N	G	L	D	H	P	F	I	L	N	G	N	N	.	.	.	.	.	.	P	A	A	L	L	S	S	N	K	H	R	L	I	V	K	T	N	A	P	A	L	V	L	Y	A	G	N	H	F	N	H	T	G	I	V	N	N	.	.	I	G	Q	Y	D	G	I	T	F	E	A	Q	C	P	P	A	E	G
Template Known Secondary structure						T	S									S		S	.	.	.	.	.	.		S						S	S								S	S	S								T	T			S		G	G	G	T	T	.	.			T	T	S								S				S	S
Template Predicted Secondary structure																			.	.	.	.	.	.																																						.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	P	E	W	P	Q	P	D	C	F	L	R	P	G	E	E	Y	S	S	L	T	E	Y	Q	F	I	A
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		N	D	L	.	.	.	.	G	Q	I	T	L	L	P	F	E	K	F	K	R	T	V	D	W	K	F	E	E
Template Known Secondary structure		S	B		.	.	.	.	G	G	G				T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		306	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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