Job Description P0A9C3 Confidence 97.26% Date Thu Jan 5 11:09:52 GMT 2012 Rank 19 Aligned Residues 126 % Identity 17% Template c3bs6B_ PDB info PDB header:membrane protein, protein transport Chain: B: PDB Molecule:inner membrane protein oxaa; PDBTitle: 1.8 angstrom crystal structure of the periplasmic domain of2 the membrane insertase yidc Resolution 1.80 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		R	L	L	T	L	R	N	N	A	G	M	V	V	T	L	M	D	W	G	A	T	L	L	S	A	R	I	P	L	.	.	.	.	.	S	D	G	S	V	R	E	A	L	L	G	C	A	S	P	E	C	Y	Q	D	Q	A	A	F	L	G	A	S	I	G	R	Y	A	N	R	I	A	N	S	R	Y	T	F	D	G	E
Query Conservation																															.	.	.	.	.
Alig confidence											.																				.	.	.	.	.												.
Template Conservation											.																																				.
Template Sequence		K	L	I	S	V	K	T	D	V	.	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	.	S	P	Q	F	I	Y	Q	A	Q	S	G	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N	V	E	K	D
Template Known Secondary structure									S	S	.							T	B	T	T												S	S	T	T			S					S			.		T	T											S	T	T		T	T	S	G	G	G	S	S			B		B		S		S
Template Predicted Secondary structure											.																																				.
Template SS confidence
		59	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		T	V	T	L	S	P	S	Q	G	V	N	Q	L	H	G	G	P	E	G	F	D	K	R	R	W	Q	I	V	N	Q	N	D	R	Q	V	L	F	A	L	S	S	D	D	G	D	Q	G	F	P	G	N	L	G	A	T	V	Q	Y	R	L	T	D	D	N	.	.	.	R	I	S	I	T	Y	R	A	T	V	D	K	P
Query Conservation																																																																		.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.															.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		A	Y	V	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	N	E	L	Q	V	P	X	T	Y	T	D	A	A	.	.	.	.	.	.	.	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K	P
Template Known Secondary structure							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S											T	T	.	.	.	.	.	.	.												T	T														S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.																							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		168	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	V	N	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	I	S	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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