Job Description P0A9C3 Confidence 96.22% Date Thu Jan 5 11:09:52 GMT 2012 Rank 20 Aligned Residues 127 % Identity 17% Template c3blcB_ PDB info PDB header:chaperone,protein transport Chain: B: PDB Molecule:inner membrane protein oxaa; PDBTitle: crystal structure of the periplasmic domain of the escherichia coli2 yidc Resolution 2.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		R	L	L	T	L	R	N	N	A	G	M	V	V	T	L	M	D	W	G	A	T	L	L	S	A	R	I	P	L	.	.	.	S	D	G	S	V	R	E	A	L	L	G	C	A	S	P	E	C	Y	Q	D	Q	A	A	F	L	G	A	S	I	G	R	Y	A	N	R	I	A	N	S	R	Y	T	F	D	G	E	T	V
Query Conservation																															.	.	.
Alig confidence											.																				.	.	.															.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																					.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	I	S	V	K	T	D	V	.	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	S	.	.	.	.	.	.	P	Q	F	I	Y	Q	A	Q	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	.							T	B	T													S	S	T	T		S	S				S	S				.	.	.	.	.	.	S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																					.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																																.
Query SS confidence																																	.	.	.	.																																.
Query Sequence		T	L	S	P	S	Q	G	V	N	Q	L	H	G	G	P	E	G	F	D	K	R	R	W	Q	I	V	N	Q	N	D	R	.	.	.	.	Q	V	L	F	A	L	S	S	D	D	G	D	Q	G	F	P	G	N	L	G	A	T	V	Q	Y	R	L	T	D	D	N	.	R	I	S	I	T	Y	R	A	T	V	D	K	P
Query Conservation																																	.	.	.	.																																.
Alig confidence		.																															.	.	.	.											.	.	.	.	.	.	.															.
Template Conservation		.																																													.	.	.	.	.	.	.
Template Sequence		.	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N	V	E	K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	X	T	Y	T	D	A	A	.	.	.	.	.	.	.	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E
Template Known Secondary structure		.			S	T	T		T	T	S	G	G	G		S			B		B		S		S						T	T													T	T	.	.	.	.	.	.	.	S											T	T														S	S
Template Predicted Secondary structure		.																																													.	.	.	.	.	.	.
Template SS confidence
			114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.								.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		168	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	V	N	M	T	N	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	L	E	I	S	S	F
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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