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Job DescriptionP0A9C3
Confidence100.00%DateThu Jan 5 11:09:52 GMT 2012
Rank7Aligned Residues311
% Identity26%Templatec1ygaA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:hypothetical 37.9 kda protein in bio3-hxt17 PDBTitle: crystal structure of saccharomyces cerevisiae yn9a protein,2 new york structural genomics consortium
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
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Query Sequence  QPYRLLTLRNNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETV
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Template Sequence  NKYGVITIGDEKKFQATIAPLGATLVDLKVNG. . . . . QSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPH
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TT

TTTTBTTTT.....
B


SSGGGGTT
SS
TT

SB
SGGGTT
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   8.10.........20.........30......... 40.........50.........60.........70.........80..
 
   93......100.........110.........120.... .....130 .........140.........150... ......160.
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Query Sequence  TLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQ. . . . . VLFALS. . . SDDGDQGFPGNLGATVQYRLTDD. . . NRISITYR
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Template Sequence  KLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQ
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BTTBTTGGG
GGGSB



TT
SSSSS


SSSTTTT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180..... ....190.........200.... .....210.........220.........230........
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Query Sequence  ATVDKPCPVNMTNHVYFNLDGEQS. . DVRNHKLQILADEYLPVDE. GGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQ
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Template Sequence  LVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDTPV. . . .
Template Known Secondary structure  SS
B



B
TTTTT
TT

TTS


TTT


S

BTT
SS

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   163......170.........180.........190.........200.........210.........220.........230........
 
   239240.........250... ......260.........270.........280.........290.........300........
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Query Sequence  RKVKGYDHAFLLQAK. . . . . . . . . . GDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLAL
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Template Sequence  . . . . . FDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTEPTVHLYTGDNLCG. . . . . . . KFVPRSGFAV
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TTTTT

SSB
TTTS


TTT

SSS

TT

T.......TS
TTS
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   239240.........250.........260.........270.........280.........290...... ...300......
 
   309310.........320.........330.........340.....
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Query Sequence  ESEFLPDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIA
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Template Sequence  QQGRYVDAINRDEWR. GCVLLKRGEVYTSKTQYKFDI
Template Known Secondary structure  S
SSGGG
.GGGTT


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   307..310.........320. ........330.........340..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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