Job Description P77319 Confidence 99.96% Date Thu Jan 5 12:27:42 GMT 2012 Rank 19 Aligned Residues 310 % Identity 15% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		E	L	A	I	G	I	D	L	G	T	T	N	S	L	I	A	V	W	K	D	G	A	A	Q	L	I	P	N	K	F	G	E	Y	L	T	P	S	I	I	S	M	D	.	E	N	N	H	I	L	V	G	K	P	A	V	S	R	R	T	S	H	P	D	K	T	A	A	L	F	K	R	A	M	G	S	N	T	N	W	R
Query Conservation																																												.
Alig confidence																												.	.	.	.	.	.	.	.									.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	P	I	I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	.	.	.	.	.	.	.	.	F	P	T	V	I	A	T	R	T	E	D	L	D	F	F	I	G	N	D	A	L	K	K	A	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	L	D	Y	P
Template Known Secondary structure											S	S							T	T	S	S	S		S			.	.	.	.	.	.	.	.											S	S					T						T					.	.	.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																						.																											.
Query SS confidence																																																						.																											.
Query Sequence		L	G	S	D	T	F	N	A	P	E	L	S	S	L	V	L	R	S	L	K	E	D	A	E	E	F	L	Q	R	P	I	K	D	V	V	I	S	V	P	A	Y	F	S	D	E	Q	R	K	H	T	R	L	.	A	A	E	L	A	G	L	N	A	V	R	L	I	N	E	P	T	A	A	A	M	A	Y	G	L	H	.
Query Conservation																																																						.																											.
Alig confidence																											.																											.																											.
Template Conservation																											.
Template Sequence		I	R	H	G	Q	I	E	N	W	D	H	M	E	R	F	W	Q	Q	S	L	F	K	Y	L	R	.	C	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	N	R	E	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S
Template Known Secondary structure				T	T																		T	T	S		.			G	G	G									T	T																T	T			S														G	G	G	G	S	T
Template Predicted Secondary structure																											.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	Q	Q	N	T	R	S	L	V	F	D	L	G	G	G	T	F	D	V	T	V	L	E	Y	A	T	P	V	I	E	V	H	A	S	A	G	D	N	F	L	G	G	E	D	F	T	H	M	L	V	D	E	V	L	K	R	A	D	V	A	R	T	T	L	N	E	S	E	L	A	A	L	Y	A	C	V	E	A
Query Conservation		.	.
Alig confidence		.	.																								.	.	.																												.	.	.	.
Template Conservation																											.	.	.																												.	.	.	.
Template Sequence		K	V	T	D	R	S	L	T	G	T	V	V	D	S	G	D	G	V	T	H	I	I	P	V	A	.	.	.	E	G	Y	V	I	G	S	S	I	K	T	M	P	L	A	G	R	D	V	T	Y	F	V	Q	S	L	L	.	.	.	.	R	L	K	T	A	E	R	I	K	E	E	C	C	Y	V	C	P	D	I	V	K
Template Known Secondary structure		T	T		S											S	S	S									.	.	.	T	T				G	G	G					S													T	T	.	.	.	.																	S
Template Predicted Secondary structure																											.	.	.																												.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		A	K	C	S	N	Q	S	P	L	H	I	R	W	Q	Y	Q	E	E	T	R	E	C	E	F	Y	E	N	E	L	E	D	L	W	L	P	L	L	N	R	L	R	V	P	I	E	Q	A	L	R	D	A	R	L	K	.	.	P	S	Q	I	D	S	L	V	L	V	G	G	A	S	Q	M	P	L	V	Q	R	I	A	V
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		E	F	S	R	F	D	R	L	K	Y	A	S	I	D	V	G	F	E	R	F	L	A	P	E	I	F	F	N	P	E	I	A	S	S	D	F	L	T	P	L	P	E	L	V	D	N	V	V	Q	S	S	P	I	D	V	R	K	G	L	Y	K	N	I	V	L	S	G	G	S	T	L	F	K	N	F	G	N	R	L	Q
Template Known Secondary structure						T	T				B				B			T					S	G	G	G	G	T		G	G	G	T		S	S			S												T	S																S	G	G	G		S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		318	.	320	.										.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.
Query Sequence		R	L	F	G	.	.	.	.	.	.	.	.	.	K	L	P	Y	Q	S	Y	D	P	S	T	I	V	A	L	G	A	A	I	Q	A	A
Query Conservation						.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	L	K	R	I	V	D	E	R	G	V	D	V	N	V	I	S	H	K	R	Q	R	N	A	V	W	F	G	G	S	L	L	A	Q
Template Known Secondary structure									T	T											T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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