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Job DescriptionP77319
Confidence100.00%DateThu Jan 5 12:27:42 GMT 2012
Rank7Aligned Residues344
% Identity38%Templatec2v7zA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:heat shock cognate 71 kda protein; PDBTitle: crystal structure of the 70-kda heat shock cognate protein2 from rattus norvegicus in post-atp hydrolysis state
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  NAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNW
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Template Sequence  SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT. DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD
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   2.......10.........20.........30.........40..... ....50.........60.........70.........80
 
   83. .....90.........100.........110.........120.........130.....
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Query Sequence  RL. . . . . . . . . . . . . . . . . . . . . . . . . . . GSDTFNAPELSSLVLRSLKEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRL
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Template Sequence  AVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKD
Template Known Secondary structure  TTS
SSTT

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   136...140.........150.........160.. .......170.........180.........190.........200.........210...
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Query Sequence  AAELAGLNAVRLINEPTAAAMAYGLHT. . QQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDE
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Template Sequence  AGTIAGLNVLRIINEPTAAAIAYGLDKKVRAERNVLIFDLGGGTFDVSILTTEDGIFEVKSTAGDTHLGGEDFDNRMVNH
Template Known Secondary structure  T
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   214.....220. ........230.........240..... ....250.........260.........270.........280......
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Query Sequence  VLKRADVA. . . RTTLNESELAALYACVEAAKCSNQ. . . . SPLHIRWQYQEETRECEFYENELEDLWLPLLNRLRVPIEQA
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Template Sequence  FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKA
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   287..290.........300.........310.........320 .........330.........340.......
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Query Sequence  LRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLF. GKLPYQSYDPSTIVALGAAIQAACRLR
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Template Sequence  LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSG
Template Known Secondary structure  TT

GGG
SSGGGG
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   321........330.........340.........350.........360.........370.........380..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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