Job Description P77319 Confidence 100.00% Date Thu Jan 5 12:27:42 GMT 2012 Rank 3 Aligned Residues 486 % Identity 35% Template c2v7yA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:chaperone protein dnak; PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state Resolution 2.37 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	N	A	E	L	A	I	G	I	D	L	G	T	T	N	S	L	I	A	V	W	K	D	G	A	A	Q	L	I	P	N	K	F	G	E	Y	L	T	P	S	I	I	S	M	D	E	N	N	H	I	L	V	G	K	P	A	V	S	R	R	T	S	H	P	D	K	T	A	A	L	F	K	R	A	M	G	S	N	T
Query Conservation
Alig confidence					.	.	.																																									.																				.
Template Conservation					.	.	.																																									.																				.
Template Sequence		M	S	K	.	.	.	I	I	G	I	D	L	G	T	T	N	S	C	V	A	V	L	E	G	G	E	V	K	V	I	P	N	P	E	G	N	R	T	T	P	S	V	V	A	F	K	.	N	G	E	R	L	V	G	E	V	A	K	R	Q	A	I	T	N	P	N	.	T	I	I	S	I	K	R	H	M	G	T	D	Y
Template Known Secondary structure					.	.	.								S	S									T	T								T	T	S		S	S								S	.	S	S	S				S					T	T	T	T	T		S	S	.					G	G	G	T	T	T	S
Template Predicted Secondary structure					.	.	.																																									.																				.
Template SS confidence
		1	.	.				.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	R	L	G	S	D	T	F	N	A	P	E	L	S	S	L	V	L	R	S	L	K	E	D	A	E	E	F	L	Q	R	P	I	K	D	V	V	I	S	V	P	A	Y	F	S	D	E	Q	R	K	H	T	R	L	A	A	E	L	A	G	L	N	A	V	R	L	I	N	E	P	T	A	A	A	M	A	Y	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	E	I	E	G	K	Q	Y	T	P	Q	E	I	S	A	I	I	L	Q	Y	L	K	S	Y	A	E	D	Y	L	G	E	P	V	T	R	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I	A	G	L	E	V	E	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L
Template Known Secondary structure						T	T																									T	S											T	T																T	T																	T	T	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		H	T	Q	Q	N	T	R	S	L	V	F	D	L	G	G	G	T	F	D	V	T	V	L	E	Y	A	T	P	V	I	E	V	H	A	S	A	G	D	N	F	L	G	G	E	D	F	T	H	M	L	V	D	E	V	L	K	R	A	D	V	A	R	T	.	.	.	T	L	N	E	S	E	L	A	A	L	Y	A	C	V
Query Conservation																																																																	.	.	.
Alig confidence																																																																	.	.	.
Template Conservation
Template Sequence		D	K	E	E	D	Q	T	I	L	V	Y	D	L	G	G	G	T	F	D	V	S	I	L	E	L	G	D	G	V	F	E	V	K	A	T	A	G	D	N	H	L	G	G	D	D	F	D	Q	V	I	I	D	Y	L	V	N	Q	F	K	Q	E	H	G	I	D	L	S	K	D	K	M	A	L	Q	R	L	K	D	A	A
Template Known Secondary structure		G	G	S		S										S	S											T	T											T	T		S																					S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		E	A	A	K	C	S	N	Q	S	P	L	H	I	R	W	Q	Y	Q	.	.	.	.	.	.	.	.	E	E	T	R	E	C	E	F	Y	E	N	E	L	E	D	L	W	L	P	L	L	N	R	L	R	V	P	I	E	Q	A	L	R	D	A	R	L	K	P	S	Q	I	D	S	L	V	L	V	G	G	A	S	Q	M
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	A	K	K	E	L	S	G	V	T	Q	T	Q	I	S	L	P	F	I	S	A	N	E	N	G	P	L	H	L	E	M	T	L	T	R	A	K	F	E	E	L	S	A	H	L	V	E	R	T	M	G	P	V	R	Q	A	L	Q	D	A	G	L	T	P	A	D	I	D	K	V	I	L	V	G	G	S	T	R	I
Template Known Secondary structure								T	T	T		S													T	T																		T						T	T												T			G	G	G		S						S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	V	Q	R	I	A	V	R	L	F	G	K	L	P	Y	Q	S	Y	D	P	S	T	I	V	A	L	G	A	A	I	Q	A	A	C	R	L	R	S	E	D	I	E	E	V	I	L	T	D	I	C	P	Y	S	L	G	V	E	V	N	R	Q	G	V	S	G	I	F	S	P	I	I	E	R	N	T	T	V	P	V
Query Conservation
Alig confidence																																										.	.																		.	.	.	.
Template Conservation																																										.	.																		.	.	.	.
Template Sequence		P	A	V	Q	E	A	I	K	R	E	L	G	K	E	P	H	K	G	V	N	P	D	E	V	V	A	I	G	A	A	I	Q	G	G	V	I	A	G	E	V	.	.	K	D	V	V	L	L	D	V	T	P	L	S	L	G	I	E	T	.	.	.	.	M	G	G	V	F	T	K	L	I	E	R	N	T	T	I	P	T
Template Known Secondary structure													S	S			B			S		T	T	T															T			.	.								B		S	S							.	.	.	.	T	T	T								T	T		B	S	S
Template Predicted Secondary structure																																										.	.																		.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.					.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.			.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		S	R	V	E	T	Y	S	T	M	H	P	E	Q	D	S	I	T	V	N	V	Y	Q	G	E	N	H	K	V	K	N	N	I	L	V	E	S	F	D	V	P	L	K	K	.	.	T	G	A	Y	Q	S	I	D	I	R	F	S	Y	D	I	N	G	L	L	E	V	D	V	L	L	E	D	G	S	V	K	S	R	V	I
Query Conservation																																													.	.
Alig confidence																																													.	.
Template Conservation
Template Sequence		S	K	S	Q	V	F	T	T	A	A	D	N	Q	T	T	V	D	I	H	V	L	Q	G	E	R	P	M	A	A	D	N	K	S	L	G	R	F	Q	L	T	G	I	P	P	A	P	R	G	V	P	Q	I	E	V	T	F	D	I	D	A	N	G	I	V	H	V	R	A	K	D	L	G	T	N	K	E	Q	S	I	T
Template Known Secondary structure										S	S	T	T												S	S	S	B	G	G	G	S																T	T		S										T	T	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	S	P	V	T	L	S	A	Q	Q	I	E	E	S	R	T	R	L	S	A	L	K	I	Y	P	R	D	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	S	S	S	G	L	S	E	E	E	I	Q	R	M	I	K	E	A	E	E	N	A	E	A	D	R	K	R	K
Template Known Secondary structure				S	S		S			S													S		G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.