Job Description P77319 Confidence 91.97% Date Thu Jan 5 12:27:42 GMT 2012 Rank 111 Aligned Residues 242 % Identity 16% Template c2hoeA_ PDB info PDB header:transferase Chain: A: PDB Molecule:n-acetylglucosamine kinase; PDBTitle: crystal structure of n-acetylglucosamine kinase (tm1224) from2 thermotoga maritima at 2.46 a resolution Resolution 2.46 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	G	I	D	L	G	T	T	N	S	L	I	A	V	W	K	D	G	A	A	Q	L	I	P	N	K	F	G	E	Y	L	T	P	S	I	I	S	M	D	E	N	N	H	I	L	V	G	K	P	A	V	S	R	R	T	S	H	P	D	K	T	A	A	L	F	K	R	A	M	G	S	N	T	N	W	R	L	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	L	G	I	E	V	T	R	D	E	I	A	A	C	L	I	D	A	S	X	N	I	L	A	H	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	L	P
Template Known Secondary structure										S	S									T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																																																	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	T	F	N	A	P	E	L	S	S	L	V	L	R	S	L	K	E	D	A	E	.	.	E	F	L	Q	R	P	I	K	D	V	V	I	S	V	P	A	Y	F	S	D	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	H	T	R	L	A	A	E	L	A	G	L	N	A	V	R	L
Query Conservation																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation					.																																																																					.	.	.	.
Template Sequence		S	Q	S	.	D	R	E	E	T	L	N	V	X	Y	R	I	I	D	R	A	K	D	X	X	E	K	L	G	S	K	L	S	A	L	T	V	A	A	P	G	P	I	D	T	E	R	G	I	I	I	D	P	R	N	F	P	L	S	Q	I	P	L	A	N	L	L	K	E	K	Y	G	I	.	.	.	.	E	V	W	V
Template Known Secondary structure		S	S		.																							T	T											S	S				T	T	T	T						S	S		T	T	B	T	S												S	.	.	.	.
Template Predicted Secondary structure					.																																																																					.	.	.	.
Template SS confidence
		108	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.												.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		I	N	E	P	T	A	A	A	M	A	Y	G	L	H	T	Q	Q	N	T	R	S	L	V	F	D	L	G	G	G	T	F	D	V	T	V	L	E	Y	.	.	.	.	.	.	.	.	.	.	.	A	T	P	V	I	E	V	H	A	S	A	G	D	N	F	L	G	G	E	D	F	.	T	H	M	L	V	D	E	V	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																															.									.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																															.
Template Sequence		E	N	D	A	D	X	G	A	V	G	E	K	W	Y	T	K	R	D	D	S	F	A	W	I	L	T	G	K	G	.	I	G	A	G	I	I	I	D	G	E	L	Y	R	G	E	N	G	Y	A	G	E	I	G	Y	T	R	V	F	N	G	N	E	Y	V	F	L	E	D	V	C	N	E	N	V	V	L	K	H	V	L
Template Known Secondary structure																T	T			S								S	S	S	.								T	T						S	S	S					G	G	G						S	S	S
Template Predicted Secondary structure																															.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	A	D	V	A	R	T	T	L	N	E	S	E	L	A	A	L	Y	A	C	V	E	A	A	K	C	S	N	Q	S	P	L	H	I	R	W	Q	Y	Q	E	E	T	R	E	C	E	F	Y	E	N	E	L	E	D	L	W	L	P	L	L	N	R	L	R	V	P	I	E	Q	A	L	R	D	A	R	L	K	P	S
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		S	X	G	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	E	A	R	D	S	G	D	V	R	V	K	E	Y	F	D	D	I	A	R	Y	F	S	I	G	L	L	N	L	I	H	L	F	G	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T																												.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
		262	.	.	.	.																																					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		296	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320									.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure															.													.	.	.	.	.	.	.	.
Query SS confidence															.													.	.	.	.	.	.	.	.
Query Sequence		Q	I	D	S	L	V	L	V	G	G	A	S	Q	.	M	P	L	V	Q	R	I	A	V	R	L	F	.	.	.	.	.	.	.	.	G	K	L	P	Y	Q	S	Y	D	P	S	T	I	V	A	L	G	A	A	I	Q	A
Query Conservation															.													.	.	.	.	.	.	.	.
Alig confidence		.													.													.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	I	S	K	I	V	I	G	G	F	F	K	E	L	G	E	N	F	L	K	K	I	K	I	E	V	E	T	H	L	L	Y	K	H	S	V	D	X	S	F	S	K	V	Q	E	P	V	I	A	F	G	A	A	V	H	A
Template Known Secondary structure		.									G	G	G	G	G																	S	S	S												S
Template Predicted Secondary structure		.
Template SS confidence
			303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions