 |
Job Description | P77319 | Confidence | 96.36% | Date | Thu Jan 5 12:27:42 GMT 2012 |
Rank | 89 | Aligned Residues | 114 |
% Identity | 15% | Template | c1t6dB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:exopolyphosphatase; |
PDBTitle: miras phasing of the aquifex aeolicus ppx/gppa phosphatase: crystal2 structure of the type ii variant
|
Resolution | 2.15 Å |
|
 |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | |
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
A | P | E | L | S | S | L | V | L | R | S | L | K | E | D | A | E | E | F | L | Q | R | P | I | K | D | V | V | I | S | V | P | A | Y | F | S | D | E | Q | R | K | H | T | R | L | A | A | E | L | A | G | L | N | A | V | R | L | I | N | E | P | T | A | A | A | M | A | Y | G | L | H | T | . |
. |
Q | Q | N | T | R | S |
Query Conservation |   |
  |   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | I | E | E | T | I | Q | V | L | K | E | Y | K | K | L | I | D | E | F | . |
K | V | E | R | X | K | A | V | A | T | E | A | I | R | R | A | K | N | A | E | E | F | L | E | R | V | K | R | E | V | G | L | V | V | E | V | I | T | P | E | Q | E | G | R | Y | A | Y | L | A | V | A | Y | S | L | K | P | E | G | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
| S |  |  |  |  |  |  |
| T | T | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | F | D | L | G | G | G | T | F | D | V | T | V | L | E | Y | A | T | P | V | I | E | V | H | A | S | A | G | D | N | F | L | G | G | E | D | F | T | H | M | L |
Query Conservation |   |
|
|   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |
Template Sequence |   |
X | V | V | D | Q | G | G | G | S | T | E | Y | V | F | G | K | G | Y | . |
. |
. |
. |
. |
K | V | R | E | V | I | S | L | P | I | G | I | V | N | L | T | E | T | F |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|