Job Description P77319 Confidence 100.00% Date Thu Jan 5 12:27:42 GMT 2012 Rank 11 Aligned Residues 320 % Identity 13% Template c1o1f4_ PDB info PDB header:contractile protein Chain: 4: PDB Molecule:skeletal muscle actin; PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle Resolution 70.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	A	E	L	A	I	G	I	D	L	G	T	T	N	S	L	I	A	V	W	K	D	G	A	A	Q	L	I	P	N	K	F	G	E	Y	L	T	P	S	I	I	S	M	D	E	N	N	H	I	L	V	G	K	P	A	V	S	R	R	T	S	H	P	D	K	T	A	A	L	F	K	R	A	M	G	S	N	T	N
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Sequence		E	D	E	T	T	A	L	V	C	D	N	G	S	G	L	V	K	A	G	F	A	G	D	D	A	P	R	A	V	.	.	.	.	.	.	.	.	F	P	S	I	V	G	R	P	R	H	Q	G	V	M	V	G	M	G	Q	K	D	S	Y	V	G	D	E	A	Q	S	K	R	G	I	.	.	.	.	.	L	T	L	K
Template Known Secondary structure		T	T	T	T	T								S	S							T	T		S	S		S			.	.	.	.	.	.	.	.									S	S					T	T					S				T						T	G	G	G	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		W	R	L	G	S	D	T	F	N	A	P	E	L	S	S	L	V	L	R	S	L	K	E	D	A	E	E	F	L	Q	R	P	I	K	D	V	V	I	S	V	P	A	Y	F	S	D	E	Q	R	K	H	T	R	L	.	A	A	E	L	A	G	L	N	A	V	R	L	I	N	E	P	T	A	A	A	M	A	Y	G	L
Query Conservation																																																								.
Alig confidence																												.																												.
Template Conservation																												.
Template Sequence		Y	P	I	E	H	G	I	I	T	N	W	D	D	M	E	K	I	W	H	H	T	F	Y	N	E	L	.	R	V	A	P	E	E	H	P	T	L	L	T	E	A	P	L	N	P	K	A	N	R	E	K	M	T	Q	I	M	F	E	T	F	N	V	P	A	M	Y	V	A	I	Q	A	V	L	S	L	Y	A	S	G	R
Template Known Secondary structure			S			T	T																		T	T	T	.				G	G	G	S								T	T																	T			S															T	S
Template Predicted Secondary structure																												.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		H	T	Q	Q	N	T	R	S	L	V	F	D	L	G	G	G	T	F	D	V	T	V	L	E	Y	A	T	P	V	I	E	V	H	A	S	A	G	D	N	F	L	G	G	E	D	F	T	H	M	L	V	D	E	V	L	K	R	A	D	V	A	R	T	T	L	N	E	S	E	L	A	A	L	Y	A	C	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence		.	.	.	.	.																				.	.	.																																																		.	.	.	.
Template Conservation		.	.	.	.	.																				.	.	.
Template Sequence		.	.	.	.	.	T	T	G	I	V	L	D	S	G	D	G	V	T	H	N	V	P	I	Y	.	.	.	E	G	Y	A	L	P	H	A	I	M	R	L	D	L	A	G	R	D	L	T	D	Y	L	M	K	I	L	T	E	R	G	Y	S	F	V	T	T	A	E	R	E	I	V	R	D	I	K	E	K	L	C	Y	V
Template Known Secondary structure		.	.	.	.	.	S	S								S	S									.	.	.	T	T				G	G	G																					T	T	T					S
Template Predicted Secondary structure		.	.	.	.	.																				.	.	.
Template SS confidence
							148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
							237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.									270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.	.	.																									.	.
Query SS confidence		.	.	.	.	.																																		.	.	.	.	.	.	.	.																									.	.
Query Sequence		.	.	.	.	.	V	E	A	A	K	C	S	N	Q	S	P	L	H	I	R	W	Q	Y	Q	E	E	T	R	E	C	E	F	Y	E	N	E	L	E	.	.	.	.	.	.	.	.	D	L	W	L	P	L	L	N	R	L	R	V	P	I	E	Q	A	L	R	D	A	R	L	K	.	.	P	S	Q	I	D	S	L	V
Query Conservation		.	.	.	.	.																																		.	.	.	.	.	.	.	.																									.	.
Alig confidence		.	.	.	.	.																				.														.	.	.	.	.	.	.	.																									.	.
Template Conservation																										.
Template Sequence		A	L	D	F	E	N	E	M	A	T	A	A	S	S	S	S	L	E	K	S	Y	E	L	P	.	D	G	Q	V	I	T	I	G	N	E	R	F	R	C	P	E	T	L	F	Q	P	S	F	I	G	M	E	S	A	G	I	H	E	T	T	Y	N	S	I	M	K	C	D	I	D	I	R	K	D	L	Y	A	N	N	V
Template Known Secondary structure			S	S	S												T	T							S	.	S	S						S	S					T	T						G	G	G	G	T			S												T	T	S		T	T	T						T
Template Predicted Secondary structure																										.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.									.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		L	V	G	G	A	S	Q	M	P	L	V	Q	R	I	A	V	R	L	F	G	.	.	.	.	.	.	.	.	K	L	P	Y	Q	S	Y	D	P	S	T	I	V	A	L	G	A	A	I	Q	A	A	C
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	G	G	T	T	M	Y	P	G	I	A	D	R	M	Q	K	E	I	T	A	L	A	P	S	T	M	K	I	K	I	I	A	P	P	E	R	K	Y	S	V	W	I	G	G	S	I	L	A	S	L
Template Known Secondary structure				S	G	G	G	G	S	T	T											T	T	S		T	T	S								T	T	G	G	G												S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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