Job Description P77319 Confidence 100.00% Date Thu Jan 5 12:27:42 GMT 2012 Rank 8 Aligned Residues 326 % Identity 22% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		M	D	N	A	E	L	A	I	G	I	D	L	G	T	T	N	S	L	I	A	V	W	K	D	G	A	A	Q	L	I	P	N	K	F	G	E	Y	L	T	P	S	I	I	S	M	D	E	N	N	H	.	.	I	L	V	G	K	P	A	V	S	R	R	T	S	H	P	D	K	T	A	A	L	F	K	R	A	M	G	S
Query Conservation																																																				.	.
Alig confidence						.	.																						.	.	.	.	.	.	.	.	.															.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																						.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	R	K	.	.	D	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	.	.	.	.	.	.	.	.	.	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S		.	.								S	S							T	T	T				.	.	.	.	.	.	.	.	.					S						T	T	T							S					T	T	T	T	S			T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.																						.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	N	W	R	L	G	S	D	T	F	N	A	P	E	L	S	S	L	V	L	R	S	L	K	E	D	A	E	E	F	L	Q	R	P	I	K	D	V	V	I	S	V	P	A	Y	F	S	D	E	Q	R	K	H	T	R	L	A	A	E	L	A	G	L	N	A	V	R	L	I	N	E	P	T	A	A	A	M	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	I	R	P	M	R	D	G	V	I	A	D	Y	T	V	A	L	V	M	L	R	Y	F	I	N	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G	L	E	A	G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S
Template Known Secondary structure									T	T			S	S																	T	S			S	S										S	S															T	T	T		S														T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	H	T	Q	Q	N	T	R	S	L	V	F	D	L	G	G	G	T	F	D	V	T	V	L	E	Y	A	T	P	V	I	E	V	H	A	S	A	G	D	N	F	L	G	G	E	D	F	T	H	M	L	V	D	E	V	L	K	R	A	D	V	A	R	T	T	L	N	E	S	E	L	A	A	L	Y	A	C	V	E
Query Conservation
Alig confidence																														.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		N	L	N	V	E	E	P	S	G	N	M	V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	G	.	.	.	.	.	S	I	V	T	W	E	S	I	R	I	A	G	D	E	M	D	E	A	I	V	Q	Y	V	R	E	T	Y	R	V	A	I	G	E	R	T	A	E	R	V	K	I	E	I	G	N	V	F
Template Known Secondary structure		T			S	S	S	S	S									S	S									T	T	.	.	.	.	.									S		S																																		B		S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		239	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure											.	.																																																		.	.	.
Query SS confidence											.	.																																																		.	.	.
Query Sequence		A	A	K	C	S	N	Q	S	P	.	.	L	H	I	R	W	Q	Y	Q	E	E	T	R	E	C	E	F	Y	E	N	E	L	E	D	L	W	L	P	L	L	N	R	L	R	V	P	I	E	Q	A	L	R	D	A	R	L	K	P	S	Q	.	.	.	I	D	S	L	V	L	V	G	G	A	S	Q	M	P	L	V	Q
Query Conservation											.	.																																																		.	.	.
Alig confidence											.	.																																																		.	.	.
Template Conservation
Template Sequence		P	S	K	E	N	D	E	L	E	T	T	V	S	G	I	D	L	S	T	G	L	P	R	K	L	T	L	K	G	G	E	V	R	E	A	L	R	S	V	V	V	A	I	V	E	S	V	R	T	T	L	E	K	T	P	P	E	L	V	S	D	I	I	E	R	G	I	F	L	T	G	G	G	S	L	L	R	G	L	D
Template Known Secondary structure								T										T	T	T	T																																	T	S																	S	G	G	G		S	B	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	V	R	L	F	G	K	L	P	Y	Q	S	Y	D	P	S	T	I	V	A	L	G	A	A	I	Q	A	A	C	R	L	R	S	E	D	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	Q	K	E	T	G	I	S	V	I	R	S	E	E	P	L	T	A	V	A	K	G	A	G	M	V	L	D	K	V	N	I	L	K	K	L	Q
Template Known Secondary structure										S						S	S	S	T	T									T	T	S						T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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