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Job DescriptionP77319
Confidence100.00%DateThu Jan 5 12:27:42 GMT 2012
Rank6Aligned Residues339
% Identity38%Templatec1hpmA_
PDB info PDB header:hydrolase (acting on acid anhydrides)Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat- PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........
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Query Sequence  AIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSN. . . . . . .
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Template Sequence  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT. DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ
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SSTT


TTS
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TTTTTT
GGG

GGGTTT

TT
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   6...10.........20.........30.........40..... ....50.........60.........70.........80....
 
   80.........90.........100.........110.........120.........130.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . TNWRLGSDTFNAPELSSLVLRSLKEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAEL
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Template Sequence  SDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTI
Template Known Secondary structure  TT
SSTTTT
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TT

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   140.........150.........160.... .....170.........180.........190.........200.........210.......
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Query Sequence  AGLNAVRLINEPTAAAMAYGLHTQQ. . NTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKR
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Template Sequence  AGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAE
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TTTTS

SS

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TTTT
S
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   218. 220.........230.........240....... ..250.........260.........270.........280.........290
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Query Sequence  AD. . . VARTTLNESELAALYACVEAAKCSNQSP. . . . LHIRWQYQEETRECEFYENELEDLWLPLLNRLRVPIEQALRDA
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Template Sequence  FKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA
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TT
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   291........300.........310.........320.. .......330.........340......
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Query Sequence  RLKPSQIDSLVLVGGASQMPLVQRIAVRLFGK. LPYQSYDPSTIVALGAAIQAACRL
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Template Sequence  KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS
Template Known Secondary structure  T

GGG

SGGGG
TTT


B
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   325....330.........340.........350.........360.........370.........380.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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