 |
Job Description | P38393 | Confidence | 5.19% | Date | Thu Jan 5 11:58:06 GMT 2012 |
Rank | 30 | Aligned Residues | 33 |
% Identity | 33% | Template | c2vkyB_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:tail protein, piigcn4; |
PDBTitle: headbinding domain of phage p22 tailspike c-terminally2 fused to isoleucine zipper piigcn4 (chimera i)
|
Resolution | 2.05 Å |
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | Y | I | A | S | A | N | N | I | K | K | R | K | L | Y | I | R | N | L | T | T | K | T | F | I | T | D | R | M | I | K | V | F | L | G | R |
Query Conservation |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
Template Sequence |   |
R | S | F | K | A | V | A | N | . |
. |
. |
. |
G | K | I | Y | I | G | Q | I | D | T | D | P | V | N | P | A | N | Q | I | P | V | Y | I | E | N |
Template Known Secondary structure |   |
S | S | S | S | B |
| T | T | . | . | . | . |
|  |  |  |  |  | S | T | T | S |
| T | T | S | G | G | G | B |
|
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | |
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|