 |
| Job Description | P38393 | | Confidence | 7.05% | Date | Thu Jan 5 11:58:06 GMT 2012 |
| Rank | 26 | Aligned Residues | 21 |
| % Identity | 24% | Template | c2l23A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25; |
PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein
|
| Resolution | UNK |
|
| | |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | |  |
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | T | D | R | M | I | K | V | F | L | G | R | D | G | L | P | V | K | A | E | S | W |
| Query Conservation | |
| |
| | |
|
|
|
|
| |
| |
| |
|
| | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
| |
| |
| | | | . | |
| | |
| |
|
| |
|
| Template Sequence | |
T | R | S | L | P | C | Q | V | Y | V | N | . |
H | G | E | N | L | K | T | E | Q | W |
| Template Known Secondary structure | |
| | | | | | | | | | S | . | S | S |
|
|
| S |
| S | S |
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | . |
|
|
|
|
|
|  | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
35 | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
