 |
Job Description | P38393 | Confidence | 19.69% | Date | Thu Jan 5 11:58:06 GMT 2012 |
Rank | 7 | Aligned Residues | 37 |
% Identity | 11% | Template | c2kcaA_ |
PDB info |
PDB header:virus | Chain: A: PDB Molecule:bacteriophage spp1 complete nucleotide sequence; |
PDBTitle: gp16
|
Resolution | UNK |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | C | V | T | P | G | D | Y | V | L | H | E | G | R | T | Y | I | A | S | A | N | . |
N | I | K | K | R | K | L | Y | I | R | N | L | T | T | K |
Query Conservation |   |
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|
| . |   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
D | D | R | I | D | K | K | M | R | V | I | Y | R | G | K | I | V | T | F | I | G | D | P | V | D | L | S | G | L | Q | E | I | T | R | I | K | G | K |
Template Known Secondary structure |   |
|
|
| S | S | S | S |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|