Job Description P77239 Confidence 100.00% Date Thu Jan 5 12:26:42 GMT 2012 Rank 1 Aligned Residues 295 % Identity 100% Template c3h9iB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli Resolution 3.40 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		Q	N	L	G	V	K	T	A	T	V	T	R	G	P	L	T	F	A	Q	S	F	P	A	N	V	S	Y	N	E	Y	Q	Y	A	I	V	Q	A	R	A	A	G	F	I	D	K	V	Y	.	P	L	T	V	G	D	K	V	Q	K	G	T	P	L	L	D	L	T	I	P	D	W	V	E	A	Q	S	E	Y	L	L	L
Query Conservation																																																	.
Alig confidence																																																	.			.
Template Conservation																																																				.
Template Sequence		Q	N	L	G	V	K	T	A	T	V	T	R	G	P	L	T	F	A	Q	S	F	P	A	N	V	S	Y	N	E	Y	Q	Y	A	I	V	Q	A	R	A	A	G	F	I	D	K	V	Y	P	L	T	.	V	G	D	K	V	Q	K	G	T	P	L	L	D	L	T	I	P	D	W	V	E	A	Q	S	E	Y	L	L	L
Template Known Secondary structure												B																B		T	T									S									S			.	S	S					T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	T	G	G	T	A	T	Q	T	E	G	I	L	E	R	L	R	L	A	G	M	P	E	A	D	I	R	R	L	I	A	T	Q	K	I	Q	T	R	F	T	L	K	A	P	I	D	G	V	I	T	A	F	D	L	R	A	G	M	N	I	A	K	D	N	V	V	A	K	I	Q	G	M	D	P	V	W	V	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	T	G	G	T	A	T	Q	T	E	G	I	L	E	R	L	R	L	A	G	M	P	E	A	D	I	R	R	L	I	A	T	Q	K	I	Q	T	R	F	T	L	K	A	P	I	D	G	V	I	T	A	F	D	L	R	A	G	M	N	I	A	K	D	N	V	V	A	K	I	Q	G	M	D	P	V	W	V	T	A
Template Known Secondary structure				S																		T																								S	S					S						S	S					S											S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	P	E	S	I	A	W	L	V	K	D	A	S	Q	F	T	L	T	V	P	A	R	P	D	K	T	L	T	I	R	K	W	T	L	L	P	G	V	D	A	A	T	R	T	L	Q	L	R	L	E	V	D	N	A	D	E	A	L	K	P	G	M	N	A	W	L	Q	L	N	T	A	S	E	P	M	L	L	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	P	E	S	I	A	W	L	V	K	D	A	S	Q	F	T	L	T	V	P	A	R	P	D	K	T	L	T	I	R	K	W	T	L	L	P	G	V	D	A	A	T	R	T	L	Q	L	R	L	E	V	D	N	A	D	E	A	L	K	P	G	M	N	A	W	L	Q	L	N	T	A	S	E	P	M	L	L	I	P
Template Known Secondary structure														G	G	G						S	S				S															T	T	T	T												S	S				T	T												S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	A	L	I	D	T	G	S	E	Q	R	V	I	T	V	D	A	D	G	R	F	V	P	K	R	V	A	V	F	Q	A	S	Q	G	V	T	A	L	R	S	G	L	A	E	G	E	K	V	V	S	S	G	L	F	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	A	L	I	D	T	G	S	E	Q	R	V	I	T	V	D	A	D	G	R	F	V	P	K	R	V	A	V	F	Q	A	S	Q	G	V	T	A	L	R	S	G	L	A	E	G	E	K	V	V	S	S	G	L	F	L	I
Template Known Secondary structure		G	G	G		B		S	S	S									S	S	S														T	T							S			T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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