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Job DescriptionP0AAW1
Confidence99.95%DateThu Jan 5 11:13:59 GMT 2012
Rank13Aligned Residues244
% Identity16%Templatec3i46B_
PDB info PDB header:toxinChain: B: PDB Molecule:beta-hemolysin; PDBTitle: crystal structure of beta toxin from staphylococcus aureus f277a,2 p278a mutant with bound calcium ions
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SFKVLTINIHKGFTAF. . . . NRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLAD. . TMWSDFA
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Template Sequence  DLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKT
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Query Sequence  YGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVD. . . . GAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAH. . . . . . . . .
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Template Sequence  EGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRA
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   8990.........100.........110.........120.........130.........140.........150.........160........
 
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Query Sequence  RQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQA. . . . . . . . . GLDEIFTRAHGRPARTFPVQFPLLRLDRI
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Template Sequence  EQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYI
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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   221........230.........240. ........250..
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Query Sequence  YVKNASASAPTALPLRTWRHL. . . . . . . . . . . . . . . . . SDHAPLSAEIH
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Template Sequence  FTDKDHKQPKQLVNEVVTEKPKPWDVYAAAYYYVYNDFSDHYPIKAYSK
Template Known Secondary structure  BTTS


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   249250.........260.........270.........280.........290.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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