Job Description P0AAW1 Confidence 99.96% Date Thu Jan 5 11:13:59 GMT 2012 Rank 12 Aligned Residues 225 % Identity 16% Template c2jc5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease; PDBTitle: apurinic apyrimidinic (ap) endonuclease (nape) from2 neisseria meningitidis Resolution 1.50 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	V	L	T	I	N	I	H	K	G	F	T	A	F	N	R	R	F	I	L	P	E	L	R	D	A	V	R	T	V	S	A	D	I	V	C	L	Q	E	V	M	G	A	H	E	V	H	P	L	H	V	E	N	W	P	D	T	S	H	Y	E	F	L	A	D	T	M	W	S	D	F	A	Y	G	R	N	A	V	Y
Query Conservation
Alig confidence													.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	I	I	S	A	N	V	N	G	I	.	.	.	.	.	R	S	A	Y	K	K	G	F	Y	E	Y	I	A	A	S	G	A	D	I	V	C	V	Q	E	L	K	A	Q	E	A	D	L	S	A	D	M	K	N	P	H	G	M	H	G	H	W	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	E
Template Known Secondary structure										S	S		.	.	.	.	.						T	T								T	T		S											G	G	G							S	G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure													.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.															60	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		P	E	G	H	H	G	N	A	V	L	S	R	Y	P	I	E	H	Y	E	N	R	D	V	S	V	D	G	A	E	K	R	G	V	L	Y	C	R	I	V	P	P	M	T	G	K	A	I	H	V	M	C	V	H	L	G	L	R	E	A	H	R	Q	A	Q	L	A	M	L	A	E	W	V	N	E	L	.	P	D	G	E
Query Conservation																																																																													.
Alig confidence																																																																													.
Template Conservation
Template Sequence		K	R	G	Y	S	G	V	A	V	Y	S	K	R	K	P	D	N	V	Q	I	G	M	G	I	E	E	F	D	R	E	G	R	F	V	R	C	D	F	G	R	L	S	V	I	S	L	Y	L	P	S	G	S	S	A	E	E	R	Q	Q	V	K	Y	R	F	L	D	A	F	Y	P	M	L	E	A	M	K	N	E	G	R
Template Known Secondary structure		S	T	T									S	S			S					S		S						T	T									T	T												T	T																									T		S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.																						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		P	V	L	V	A	G	D	F	N	D	W	R	Q	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	P	L	K	V	Q	A	G	L	D	E	I	F	T	R	A	H	G	R	P	A	R	T	F	P	.	.	.	.	.	.	.	.	V	Q	F	P	L	L	R	L	D	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	V	V	C	G	D	W	N	I	A	H	Q	N	I	D	L	K	N	W	K	G	N	Q	K	N	S	G	F	L	P	E	E	R	E	W	I	G	K	V	I	H	K	L	G	W	T	D	M	W	R	T	L	Y	P	D	V	P	G	Y	T	W	W	S	N	R	G	Q	A	Y	A	K	D	V	G	W	R	I	D	Y
Template Known Secondary structure														S	G	G	G	B	S		S	T	T		T	T	S	T	T	S														T	T											T	T								S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	V	K	N	A	S	A	S	A	P	T	A	L	P	L	R	T	W	R	H	L	S	D	H	A	P	L	S	A	E	I	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	M	V	T	P	E	L	A	A	K	A	V	S	A	H	V	Y	K	D	E	K	F	S	D	H	A	P	L	V	V	E	Y	D	Y
Template Known Secondary structure										T	T									S	S			S	S	B								S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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