Job Description P0AAW1 Confidence 99.94% Date Thu Jan 5 11:13:59 GMT 2012 Rank 19 Aligned Residues 221 % Identity 23% Template c2jc4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: 3'-5' exonuclease (nexo) from neisseria meningitidis Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	V	L	T	I	N	I	H	K	G	F	T	A	F	N	R	R	F	I	L	P	E	L	R	D	A	V	R	T	V	S	A	D	I	V	C	L	Q	E	V	M	G	A	H	E	V	H	P	L	H	V	E	N	W	P	D	T	S	H	Y	E	F	L	A	D	T	M	W	S	D	F	A	Y	G	R	N	A	V	Y
Query Conservation
Alig confidence													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	T	T	W	N	V	N	S	L	.	.	.	.	.	.	N	V	R	L	P	Q	V	Q	N	L	L	A	D	N	P	P	D	I	L	V	L	Q	E	L	K	L	D	Q	D	K	F	P	A	A	A	L	Q	M	M	G	W	H	C	V	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G
Template Known Secondary structure										S			.	.	.	.	.	.													S	S			S									S		G	G	G	S							T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		P	E	G	H	H	G	N	A	V	L	S	R	Y	P	I	E	H	Y	E	N	R	D	V	S	V	D	G	A	E	K	R	G	V	L	Y	C	R	I	V	P	P	M	T	G	K	A	I	H	V	M	C	V	H	L	G	L	R	E	A	H	.	R	Q	A	Q	L	A	M	L	A	E	W	V	N	E	L	P	D	G	E
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		Q	K	T	Y	N	G	V	A	I	V	S	R	S	V	P	Q	D	V	H	F	G	L	P	A	L	P	D	D	P	Q	R	R	V	I	A	A	T	V	S	G	V	R	V	I	N	V	Y	C	V	N	G	E	A	L	D	S	P	K	F	K	Y	K	E	Q	W	F	A	A	L	T	E	F	V	R	D	E	M	T	R	H
Template Known Secondary structure			S	S	S								S	S								S		T	T	S	T	T			S									T	T													S	T	T	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
			169	170	.	.	.	.	.	.	.	.	.	180	.	.																					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.									.	.	.	.	.	.	.	.
Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		.	P	V	L	V	A	G	D	F	N	D	W	R	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	H	P	L	K	V	Q	A	G	L	D	E	I	F	T	R	A	H	G	R	P	A	R	T	F	P	V	Q	.	.	.	.	.	.	.	.	F	P	L	L	R	L	D	R
Query Conservation		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	L	V	L	L	G	D	F	N	I	A	P	A	D	A	D	C	Y	D	P	E	K	W	H	E	K	I	H	C	S	S	V	E	R	Q	W	F	Q	N	L	L	D	L	G	L	T	D	S	L	R	Q	V	H	P	E	G	A	F	Y	T	W	F	D	Y	R	G	A	M	F	Q	R	K	L	G	L	R	I	D	H
Template Known Secondary structure		S	S												S	G	G	G	B	S	S	G	G	G	G	T	T		T	T	S													T	T	T											S	S					B			T	T	T	T					T			B
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		I	Y	V	K	N	A	S	A	S	A	P	T	A	L	P	L	R	T	.	.	.	.	W	R	H	L	S	D	H	A	P	L	S	A	E	I	H
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		I	L	V	S	P	A	M	A	A	A	L	K	D	V	R	V	D	L	E	T	R	A	L	E	R	P	S	D	H	A	P	V	T	A	E	F	D
Template Known Secondary structure										T	T												T	S	S	S			S	B
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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