 |
Job Description | P39409 | Confidence | 97.44% | Date | Thu Jan 5 12:00:46 GMT 2012 |
Rank | 55 | Aligned Residues | 55 |
% Identity | 18% | Template | d2fug34 |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Ferredoxin domains from multidomain proteins
|
Resolution | 3.30 |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
. | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . |
|
|
|  |  |
|
|
|
|
| . | . | . | . | . | . |  |  |  |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | G | R | C | N | D | C | G | E | C | V | P | Q | C | P | . |
. |
. |
. |
H | Q | A | L | Q | I | V | D | G | K | . |
. |
. |
. |
. |
. |
V | V | W | N | A | V | V | C | E | Q | C | D | T | C | L | K | R | C | P | Q | H | A | T | P | M | A | Q | S | M | S |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|   |   |   |
|
| . | . | . | . |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |
Template Sequence |   |
R | E | R | C | I | H | C | K | R | C | V | R | Y | F | E | E | V | P | G | D | E | V | L | D | F | I | E | R | G | V | H | T | F | I | G | T | M | D | F | G | L | P | S | G | F | S | G | N | I | T | D | I | C | P | V | G | A | L | L | D | L | T | A | R | F |
Template Known Secondary structure |   |
| S |
|
|
|
|
|
|  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|
| B | S |
| G | G | G |
| B |
|
|
| S | S | T | T |
|
| S | S |
|
| T |  |  |  |  |  |
| S | S | S | S | S | B |
| G | G | G | S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|