 |
Job Description | P39409 | Confidence | 98.29% | Date | Thu Jan 5 12:00:46 GMT 2012 |
Rank | 29 | Aligned Residues | 68 |
% Identity | 24% | Template | d1blua_ |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Short-chain ferredoxins
|
Resolution | 2.10 |
|
 |
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | M | G | R | C | N | D | C | G | E | C | V | P | Q | C | P | H | Q | A | L | Q | I | V | D | G | K | V | V | W | N | A | V | V | C | E | Q | C | . |
. |
. |
. |
. |
. |
D | T | C | L | K | R | C | P | Q | H | A | T | P | M | A | Q | S | M | S | V | D | E | V | L | S | H | V | R | K | A | V |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
| . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
Template Sequence |   |
I | T | D | E | C | I | N | C | D | V | C | E | P | E | C | P | N | G | A | I | S | Q | G | D | E | T | Y | V | I | E | P | S | L | C | T | E | C | V | G | H | Y | E | T | S | Q | C | V | E | V | C | P | V | D | C | I | I | K | D | P | S | H | E | E | T | E | D | E | L | R | A | K | Y | E | R |
Template Known Secondary structure |   |
 |
| T | T |
|
|
|
|
| T | T | G | G | G |
| T | T |
|
|  |  |  |
| S | S | S |  |  |  |
| G | G | G |
|
| T | T | T | T | T |
| S | S |
|  |  |  |  |  |
| T | T |
|
|  |  |  |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|