Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence48.57%DateThu Jan 5 12:00:46 GMT 2012
Rank192Aligned Residues59
% Identity22%Templatec3lmyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-hexosaminidase subunit beta; PDBTitle: the crystal structure of beta-hexosaminidase b in complex with2 pyrimethamine
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250......... 260.........270.........280..
Predicted Secondary structure 















...............





Query SS confidence 






































. . . . . . . . . . . . . . .






















Query Sequence  YLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWAS. . . . . . . . . . . . . . . ATPEDVEPLADALKVRGVSRLIF
Query Conservation    
 
  
   
       
 
    
 
          ...............   
            

  

 
Alig confidence 





















...













...............






















Template Conservation      
   

 

  
 
 


...



    


    
 
   
       

  
   

 

   

 



Template Sequence  PVKIILKTLDAMAFNKFNVLHW. . . HIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRMVIEYARLRGIRVLPE
Template Known Secondary structure 
TT

...

BTTB

B

SS
SSSTTS
B
TTT
Template Predicted Secondary structure 




...































Template SS confidence 












































































   215....220.........230...... ...240.........250.........260.........270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions