Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence43.75%DateThu Jan 5 12:00:46 GMT 2012
Rank215Aligned Residues57
% Identity16%Templatec3aamA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280......
Predicted Secondary structure 






















Query SS confidence 





























































Query Sequence  IEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFPALY
Query Conservation 
  
   
       
 
    
 
             
            

  

     
Alig confidence 






















.....

































Template Conservation      
  
   

  


     .....               
       

     
   
Template Sequence  VAGAVEEATALGLTAFQIFAKSP. . . . . RSWRPRALSPAEVEAFRALREASGGLPAVIHASY
Template Known Secondary structure  T
S
SS
T.....T

S




TT




T
Template Predicted Secondary structure 







.....















Template SS confidence 





























































   16...20.........30........ .40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions