Job Description P39409 Confidence 99.62% Date Thu Jan 5 12:00:46 GMT 2012 Rank 6 Aligned Residues 177 % Identity 19% Template c2z2uA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:upf0026 protein mj0257; PDBTitle: crystal structure of archaeal tyw1 Resolution 2.40 Å

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		31	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		C	N	L	R	C	K	N	C	H	.	N	P	W	T	M	G	R	C	N	D	C	G	E	C	V	P	Q	C	P	H	Q	A	L	Q	I	V	D	G	K	V	V	W	N	A	V	V	C	E	Q	C	D	T	C	L	K	R	C	P	Q	H	A	T	P	M	A	Q	S	M	S	V	D	E	V	L	S	H	V	R	K	A
Query Conservation											.
Alig confidence											.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	P	S	V	I	W	C	Q	Q	N	S	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	P	K	W	E	E	P	E	V	V	Y	E	K	I	L	A	M	H	K	R	I
Template Known Secondary structure				S		S	S			S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.																																													.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		110	.	.	.	.	.	.																			.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		V	L	F	I	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	S	G	.	G	E	A	T	T	Q	L	P	F	V	V	A	L	F	T	A	I	K	N	D	P	Q	L	R	H	L	T	C	L	V	D	S	N	G	M	L	S	E	T	G	W	E	K	L	L	P	V	C	D	G
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.									.												.	.	.	.													.										.	.
Template Conservation																																								.												.	.	.	.													.										.	.
Template Sequence		I	M	G	Y	A	G	V	L	D	R	V	G	E	K	K	F	K	E	A	L	E	P	K	H	V	A	I	S	L	S	G	E	P	T	L	Y	P	Y	.	L	D	E	L	I	K	I	F	H	K	N	.	.	.	.	G	F	T	T	F	V	V	S	N	G	I	L	.	T	D	V	I	E	K	I	E	P	.	.	T	Q
Template Known Secondary structure				G	G	G	G	G													T	S								S	S	S		G	G	G	S	T	T	.											T	.	.	.	.	T									S			.										.	.	S
Template Predicted Secondary structure																																								.												.	.	.	.													.										.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.			.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	D	L	K	A	W	G	S	E	C	H	Q	Q	L	T	G	R	D	N	Q	Q	I	K	R	S	I	Y	L	L	A	E	R	G	K	L	A	E	L	R	L	L	V	I	P	G	Q	V	D	Y	L	Q	H	I	E	E	L	A	A	F	I	K	G	L	G	D	V	P	V	R	L	N	A	F	H	A	H	G	V
Query Conservation
Alig confidence																					.																			.												.	.	.																										.	.
Template Conservation																					.																			.												.	.	.																										.	.
Template Sequence		L	Y	I	S	L	D	A	Y	D	L	D	S	Y	G	G	K	K	E	Y	.	W	E	S	I	L	N	T	L	D	I	L	K	E	K	K	R	T	C	.	I	R	T	T	L	I	R	G	Y	N	D	.	.	.	D	I	L	K	F	V	E	L	Y	E	R	A	D	V	H	F	I	E	L	K	S	Y	M	D	M	.	.
Template Known Secondary structure									S	S	T	T	T								.												T	T	S	S	S			.							T	T	T	T		.	.	.		G	G	G	T								T		S											.	.
Template Predicted Secondary structure																					.																			.												.	.	.																										.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	E	A	Q	S	W	A	S	A	T	P	E	D	V	E	P	L	A	D	A	L	K	V	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	L	Q	H	D	E	I	L	K	L	A	K	M	L	D	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.															T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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