Job Description P39409 Confidence 99.86% Date Thu Jan 5 12:00:46 GMT 2012 Rank 4 Aligned Residues 194 % Identity 20% Template c2yx0A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 Resolution 2.21 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	C	N	L	R	C	K	N	C	H	N	P	W	T	M	G	R	C	N	D	C	G	E	C	V	P	Q	C	P	H	Q	A	L	Q	I	V	D	G	K	V	V	W	N	A	V	V	C	E	Q	C	D	T	C	L	K	R	C	P	Q	H	A	T	P	M	A	Q	S	M	S	V	D	E	V	L	S	H	V	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	W	C	T	H	N	C	I	F	C	W	R	P	M	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	G	T	E	L	P	Q	P	W	D	D	P	A	F	I	V	E	E	S	I
Template Known Secondary structure		S	S			S	B			T	T				S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S	S			S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																																											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		108	.	110																				.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																								.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																								.	.
Query Sequence		K	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	I	E	G	I	T	V	S	G	.	G	E	A	T	T	Q	L	P	F	V	V	A	L	F	T	A	I	K	N	D	P	Q	L	R	H	L	T	C	L	V	D	S	N	G	M	L	S	E	T	.	.	G	W	E	K	L	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																								.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.									.												.	.	.	.																.	.
Template Conservation																																											.												.	.	.	.
Template Sequence		K	A	Q	R	K	L	L	I	G	Y	K	P	K	V	D	K	K	K	F	E	E	A	W	N	P	T	H	A	A	I	S	L	S	G	E	P	M	L	Y	P	Y	.	M	G	D	L	V	E	E	F	H	K	R	.	.	.	.	G	F	T	T	F	I	V	T	N	G	T	I	P	E	R	L	E	E	M	I	K	E	D
Template Known Secondary structure									T	T					S									T	S								S	S	S		G	G	G	S	T	T	.											T	.	.	.	.	T									S												T	T
Template Predicted Secondary structure																																											.												.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		P	V	C	D	G	A	M	L	D	L	K	A	W	G	S	E	C	H	Q	Q	L	T	G	R	D	.	.	.	.	N	Q	Q	I	K	R	S	I	Y	L	L	A	E	R	G	K	L	A	E	L	R	L	L	V	I	P	G	Q	V	D	Y	L	Q	H	I	E	E	L	A	A	F	I	K	G	L	G	D	V	P	V	R
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																															.	.
Template Conservation																																																													.	.
Template Sequence		K	L	P	T	Q	L	Y	V	S	I	T	A	P	D	I	E	T	Y	N	S	V	N	I	P	M	I	P	D	G	W	E	R	I	L	R	F	L	E	L	M	R	D	L	P	T	R	T	V	V	R	L	T	L	V	K	G	E	N	M	.	.	H	S	P	E	K	Y	A	K	L	I	L	K	A	R	P	M	F	V	E
Template Known Secondary structure					S									S	S										B	S	S	S														T	T		S	S										T	T	T	T		.	.																S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	F	H	A	H	G	V	Y	G	E	A	Q	S	W	A	S	A	T	P	E	D	V	E	P	L	A	D	A	L	K	V	R
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		A	K	A	Y	M	N	.	.	.	.	.	R	L	T	I	N	N	M	P	S	H	Q	D	I	R	E	F	A	E	A	L	V	K	H
Template Known Secondary structure								.	.	.	.	.				G	G	G	S															T	T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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