Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence76.00%DateThu Jan 5 12:00:46 GMT 2012
Rank135Aligned Residues63
% Identity17%Templatec2wcsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   219220.........230.........240.........250 .........260.........270.........280.
Predicted Secondary structure 












.......










Query SS confidence 































. . . . . . .






























Query Sequence  VDYLQHIEELAAFIKGLGDVPVRLNAFHAHGV. . . . . . . YGEAQSWASATPEDVEPLADALKVRGVSRLI
Query Conservation 

  
 
  
   
       
 
    
 
 .......            
            

  

Alig confidence 































.......






























Template Conservation   

  

   



  


  
 
 

       

   
   

   

  


 

  

  

 


Template Sequence  GGDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVL
Template Known Secondary structure  S

TT

S

STT
TTS
GGGTTT
Template Predicted Secondary structure 



































Template SS confidence 





































































   52.......60.........70.........80.........90.........100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions