Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence37.46%DateThu Jan 5 12:00:46 GMT 2012
Rank233Aligned Residues119
% Identity11%Templatec2qygC_
PDB info PDB header:unknown functionChain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180.........190.........200......
Predicted Secondary structure 














Query SS confidence 















































































Query Sequence  LPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSIYLLAERGK
Query Conservation     
       
      
      


         
    
    


           
     

  
  
     
Alig confidence 















































































Template Conservation 
 


 


 



  



 




  



   
   
  
 



 




 
      
  


    


 

  
Template Sequence  PRFGIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASA
Template Known Secondary structure 
SST

SS

SS
TT

ST
S

TT

S
TTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   207..210.........220.........230.........240.....
Predicted Secondary structure 














Query SS confidence 






































Query Sequence  LAELRLLVIPGQVDYLQHIEELAAFIKGLGDVPVRLNAF
Query Conservation   
 
    
   

  
 
  
   
       
 
   
Alig confidence 






































Template Conservation 


   


 


     
 


  
   

   

   
Template Sequence  ETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINAM
Template Known Secondary structure  SS





TTTT

Template Predicted Secondary structure 










Template SS confidence 






































   228.230.........240.........250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions