Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence29.93%DateThu Jan 5 12:00:46 GMT 2012
Rank269Aligned Residues18
% Identity39%Templatec2dcuB_
PDB info PDB header:translationChain: B: PDB Molecule:translation initiation factor 2 beta subunit; PDBTitle: crystal structure of translation initiation factor aif2betagamma2 heterodimer with gdp
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.... .....50..
Predicted Secondary structure 





.........




Query SS confidence 









. . . . . . . . .







Query Sequence  CKNCHNPWTM. . . . . . . . . GRCNDCGE
Query Conservation 
  
 


  .........  
  
  
Alig confidence 









.........







Template Conservation 
  
 



 
 
  

  
 
 



Template Sequence  CPVCGSPDTKIIKRDRFHFLKCEACGA
Template Known Secondary structure 
SSS

TT




SSSS
B


SSS

Template Predicted Secondary structure 














Template SS confidence 


























   107..110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions