Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence86.04%DateThu Jan 5 12:00:46 GMT 2012
Rank92Aligned Residues64
% Identity14%Templatec1qhoA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-amylase; PDBTitle: five-domain alpha-amylase from bacillus stearothermophilus,2 maltose/acarbose complex
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240..... ....250.........260 .........270.........280.
Predicted Secondary structure 








...............










.




Query SS confidence 



























. . . . . . . . . . . . . . .














.




















Query Sequence  QVDYLQHIEELAAFIKGLGDVPVRLNAF. . . . . . . . . . . . . . . HAHGVYGEAQSWASA. TPEDVEPLADALKVRGVSRLI
Query Conservation   

  
 
  
   
       
 
   ............... 
 
           .  
            

  

Alig confidence 



























...............














.




















Template Conservation   


  

  




  


  
 
 
                 

   
   

   

  


 

   
  

 


Template Sequence  WGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIV
Template Known Secondary structure 



TT





SS
SSTT


TTS
S
TTT

TT
Template Predicted Secondary structure 













































Template SS confidence 















































































   47..50.........60.........70.........80.........90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions