Return to main results Retrieve Phyre Job Id

Job DescriptionP39409
Confidence36.96%DateThu Jan 5 12:00:46 GMT 2012
Rank235Aligned Residues59
% Identity12%Templatec1qbaA_
PDB info PDB header:glycosyl hydrolaseChain: A: PDB Molecule:chitobiase; PDBTitle: bacterial chitobiase, glycosyl hydrolase family 20
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250......... 260.....
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Query Sequence  YLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ATPEDV
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Template Sequence  KKDAVLRLLDQMAAYKLNKFHF. . . HLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDY
Template Known Secondary structure 
TT

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B
SS
B
B

TT
TTTT
S
TT
SSSB


TTS
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B
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   353......360.........370.... .....380.........390.........400.........410.........420.........
 
   266...270.........280..
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Query Sequence  EPLADALKVRGVSRLIF
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Template Sequence  IDIIKYAQARQIEVIPE
Template Known Secondary structure  TT
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   430.........440......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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