 |
Job Description | P39409 | Confidence | 42.03% | Date | Thu Jan 5 12:00:46 GMT 2012 |
Rank | 222 | Aligned Residues | 76 |
% Identity | 11% | Template | c1dkrB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; |
PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation.
|
Resolution | 2.30 Å |
|
 |
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
. | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | K | L | A | E | L | R | L | L | V | I | P | G | Q | V | D | Y | L | Q | H | I | E | E | L | A | A | F | I | K | G | L | G | D | V | P | V | R | L | N | . |
A | F | H | A | H | G | V | Y | G | E | A | Q | S | W | A | S | A | T | P | E | D | V | E | P | L | A | D | A | L | K | V | R | G | V | S | R | L | I |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|   | . |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |
|
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|   |   |   |   |
|
|   |
|
|
|
| . | . |   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|
Template Sequence |   |
R | G | C | D | C | Y | I | I | Q | S | T | S | D | P | V | N | E | H | I | M | E | L | L | I | M | V | D | A | L | K | R | A | S | A | K | T | I | N | I | V | I | P | Y | Y | G | Y | A | R | Q | D | R | K | A | R | S | R | E | P | I | T | A | K | . |
. |
L | F | A | N | L | L | E | T | A | G | A | T | R | V | I |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  | S | S |
| T | T |
|
| S |
| S | S |
|
| S | S |
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|