 |
| Job Description | P42910 | | Confidence | 2.65% | Date | Thu Jan 5 12:02:07 GMT 2012 |
| Rank | 73 | Aligned Residues | 27 |
| % Identity | 15% | Template | d1vpua_ |
| SCOP info | HIV-1 VPU cytoplasmic domain
| HIV-1 VPU cytoplasmic domain
| HIV-1 VPU cytoplasmic domain
|
| Resolution | UNK |
|
| | |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Y | E | F | F | N | A | K | S | R | Q | Q | A | Q | P | Q | P | V | A | S | K | N | E | E | E | D | Y | S |
| Query Conservation | |
| | | | | | | | | | | | | | | | | | | | |
|
|
|
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| |
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
|
|
| |
| Template Sequence | |
I | D | R | L | I | D | R | I | T | E | R | A | E | D | S | G | N | E | S | E | G | D | Q | E | E | L | S |
| Template Known Secondary structure | |
| | | | | | | | | | T | T |
| | | | | T | T | T | T | | | | | T |
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
