Job Description P42910 Confidence 2.35% Date Thu Jan 5 12:02:07 GMT 2012 Rank 85 Aligned Residues 118 % Identity 12% Template c3b4rB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative zinc metalloprotease mj0392; PDBTitle: site-2 protease from methanocaldococcus jannaschii Resolution 3.30 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	E	A	D	T	A	A	F	S	R	L	N	W	T	T	M	L	I	V	A	S	A	Y	A	V	I	A	F	L	C	T	Y	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	A	M	Q	A	L	V	K	A	M	P	A	W	L	T	H	G	F	E	V	A	G	G	I	L	P	A	V	G	F	G
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	K	I	P	K	E	G	E	L	R	I	G	I	A	G	P	L	V	S	F	I	I	G	I	V	L	L	I	V	S	Q	F	F	D	I	N	I	N	G	Y	P	L	L	Y	T	L	S	L	L	N	L	M	L	G	G	F	N	L	I	P	A	F	P	M	D	G	G	R	I	L	R	A	I	L	S	K	.	.	.	.
Template Known Secondary structure						T	T																								T	T	T						T	T																		T	T	S	S	S	S	S	S													.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	R	V	M	F	K	A	Q	Y	I	P	Y	L	I	A	G	F	L	F	V	C	Y	I	Q	V	S	N	L	L	P	V	A	V	L	G	A	G	F	A	V	Y	E	F	F	N	A	K	S	R	Q	Q	A	Q	P	Q	P	V
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	K	Y	G	Y	L	K	S	T	K	I	A	A	N	I	G	K	S	L	A	L	I	M	L	L	F	G	L	L	S	M	N	I	I	L	I	L	V	S	L	F	V	Y	F	G	A	E	Q	E	S	R	V	V	E	V	E	T
Template Known Secondary structure		.	.	.																													T	T																	T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions