Job Description P42910 Confidence 3.17% Date Thu Jan 5 12:02:07 GMT 2012 Rank 45 Aligned Residues 179 % Identity 12% Template c2qjkM_ PDB info PDB header:electron transport Chain: M: PDB Molecule:cytochrome b; PDBTitle: crystal structure analysis of mutant rhodobacter2 sphaeroides bc1 with stigmatellin and antimycin Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.											.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																													.
Query SS confidence																.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																													.
Query Sequence		P	I	M	A	G	L	M	T	T	V	I	A	W	S	.	.	.	.	.	.	.	.	.	.	T	G	V	D	A	K	T	A	.	.	.	.	.	.	I	G	L	G	L	P	F	S	L	L	M	Q	Y	V	I	L	F	F	Y	S	A	F	S	L	F	M	T	K	.	A	D	K	C	A	K	E	A	D	T	A	A	F
Query Conservation																.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																													.
Alig confidence																.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																													.
Template Conservation
Template Sequence		W	I	W	G	V	V	L	A	F	C	L	V	L	Q	I	V	T	G	I	V	L	A	M	H	Y	T	P	H	V	D	L	A	F	A	S	V	E	H	I	M	R	N	V	N	G	G	F	M	L	R	Y	L	H	A	N	G	A	S	L	F	F	I	A	V	Y	L	H	I	F	R	G	L	Y	Y	G	S	Y	K	A	P
Template Known Secondary structure		G	T																					T	T				S														T	S	T	T																													T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	N	W	T	T	M	L	I	V	A	S	A	Y	A	V	I	A	F	L	C	T	Y	L	A	Q	G	A	M	Q	A	L	V	K	A	M	P	A	W	L	T	H	G	F	E	V	A	G	G	I	L	P	A	V	G	F	G	L	L	L	R	V	M	F	K	A	Q	Y	I	P	Y	L	I	A	G	F	L	F	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		R	E	V	T	W	I	V	G	M	L	I	Y	L	A	M	M	A	T	A	F	M	G	Y	V	L	P	W	.	.	.	.	.	.	.	G	Q	M	S	F	W	G	A	T	V	I	T	G	L	F	G	A	I	P	G	I	G	H	S	I	Q	T	W	L	L	G	G	P	A	V	D	N	A	T	L	N	R	F	F	S	L
Template Known Secondary structure		T																								T	T		.	.	.	.	.	.	.	B																T	S	S	T	T										T	S	S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	I	Q	V	S	N	L	L	P	V	A	V	L	G	A	G	F	A	V	Y	E	F	F	N	A	K	S	R	Q	Q	A	Q	P	Q	P	V	A	S	K	N	E	E	E	D
Query Conservation
Alig confidence					.			.
Template Conservation					.			.
Template Sequence		H	Y	L	.	L	P	.	F	V	I	A	A	L	V	A	I	H	I	W	A	F	H	S	T	G	N	N	N	P	T	G	V	E	V	R	R	T	S	K	A	E	A	Q	K	D
Template Known Secondary structure					.			.																						T	T							S
Template Predicted Secondary structure					.			.
Template SS confidence
		198	.	200		.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions