Job Description P46130 Confidence 98.90% Date Thu Jan 5 12:04:05 GMT 2012 Rank 7 Aligned Residues 194 % Identity 16% Template d1ru4a_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Pectate transeliminase Resolution 1.60

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		L	P	A	Q	P	D	F	V	V	G	P	A	G	T	Q	G	.	.	.	.	.	.	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																		.	.	.	.	.																.	.
Template Conservation																																									.	.	.	.	.																.	.
Template Sequence		I	S	T	K	R	I	Y	Y	V	A	P	N	G	N	S	S	N	N	G	S	S	F	N	A	P	M	S	F	S	A	A	M	A	A	V	N	P	G	E	.	.	.	.	.	L	I	L	L	K	P	G	T	Y	T	I	P	Y	T	Q	.	.	G	K	G	N	T	I	T	F	N	K	S	G	K	D	G	A	P	I	Y
Template Known Secondary structure					S							T	T			T	T			S	S	S	T	T	S		B											T	T		.	.	.	.	.						S								B	T	.	.	T	B											B	T	T	B
Template Predicted Secondary structure																																									.	.	.	.	.																.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	A	A	N	C	G	R	A	V	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	F	P	D	S	Q	W	V	Q	A	S	Y	G	F	Y	V	T	G	D	Y	W	Y	F	K	G	V	E	V	T	R	A	G	Y	Q	G	A	Y	V	I	G	S	H
Template Known Secondary structure					G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T				T	T			S					S	S						S					S		S	S		S					S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120																										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	.	.	.	.	V	D	I	V	S	G	R	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Template Conservation
Template Sequence		N	T	F	E	N	T	A	F	H	H	N	R	N	T	G	L	E	I	N	N	G	G	S	Y	N	T	V	I	N	S	D	A	Y	R	N	Y	D	P	K	K	N	G	S	M	A	D	G	F	G	P	K	Q	K	Q	G	P	G	N	R	F	V	G	C	R	A	W	E	N	S	D	D	G	F	D	L	F	D	S	P	Q
Template Known Secondary structure						S					S		S	S		S					T	T			S					S									T	T	T	T	T	S	S			S					T	T			S						S					S		S	S		S				T	T			S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		292	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	F	D	N	T	E	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	V	I	E	N	S	W	A	F
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions