Job Description P46130 Confidence 100.00% Date Thu Jan 5 12:04:05 GMT 2012 Rank 4 Aligned Residues 288 % Identity 26% Template d1qjva_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Pectin methylesterase Resolution 2.37

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	P	D	F	V	V	G	P	A	G	T	Q	G	V	T	H	T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M
Query Conservation
Alig confidence																																	.	.																			.	.														.	.
Template Conservation																																	.	.																			.	.														.	.
Template Sequence		T	T	Y	N	A	V	V	S	K	S	S	S	D	G	K	T	F	K	T	I	A	D	A	I	A	S	A	P	A	G	S	.	.	T	P	F	V	I	L	I	K	N	G	V	Y	N	E	R	L	T	I	.	.	T	R	N	N	L	H	L	K	G	E	S	R	N	.	.	G	A	V	I	A	A	A	T	A	A	G	T
Template Known Secondary structure					S					S		S	S	S	S	S		B	S	S							T	S		S	S	S	.	.	S								S										.	.		S	T	T						S		T	T	.	.	T									T	T
Template Predicted Secondary structure																																	.	.																			.	.														.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	.	.	.	.	.	.	.	.	.	.	D	S	V	D	A	G	N
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	K	W	G	T	A	G	S	S	T	I	T	I	S	A	K	D	F	S	A	Q	S	L	T	I	R	N	D	F	D	F	P	A	N	Q	A	K	S	D	S	D	S	S	K	I	K	D
Template Known Secondary structure		B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		B						T		S					S	S	S																			T	S		T	T		T	T			S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.																													.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		228	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		H	P	A	V	A	L	R	T	.	.	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S
Query Conservation										.	.
Alig confidence										.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	A	V	A	L	Y	V	T	K	S	G	D	R	A	Y	F	K	D	V	S	L	V	G	Y	Q	D	T	L	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	R	S	F	F	S	D	C	R	I	S	G	T	V	D	F	I	F	G	D	G	T	A	L	F	N	N	C	D	L	V	S	R	Y	R
Template Known Secondary structure						S					T	T			S											S	T	T					.	.	.	.	.	.	.	.	.	.	.	.		S	S						S						S							S	S						S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.													.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		306					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.	.	350	.											.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																																.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.																																.	.	.	.															.	.	.	.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	T	Q	Q	E	A	Y	V	F	A	P	A	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	.	.	.	.	D	G	V	A	Q	L	G	R	S	L	D	V	D	A	.	.	.	.	.	.	.	.	.	.	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G
Query Conservation			.	.	.	.																																.	.	.	.															.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.																																.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	V	K	S	G	N	V	S	G	Y	L	T	A	P	S	T	N	I	N	Q	K	Y	G	L	V	I	T	N	S	R	V	I	R	E	S	D	S	V	P	A	K	S	Y	G	L	G	R	P	W	H	P	T	T	T	F	S	D	G	R	Y	A	D	P	N	A	I	G	Q	T	V	F	L	N	T	S	M	D	N	H
Template Known Secondary structure		T	T	S		T	T	S												T	T		S							S						S	S	T	T	S		T	T															T	T						T	T									S					T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	T	A	K	P	W	A	D	A	V	I	S	N	R	P	F	A	G	N	T	G	S	V	D	D	N	D	E	I	Q	R	N	L	N	D	T	N	Y	N	R	M	W	E	Y	N	N	R	G	V	G	S	K	V	V	A	E	A	K	K
Query Conservation
Alig confidence			.	.			.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.			.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	.	.	Y	G	.	W	D	K	M	S	G	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	G	N	T	I	W	F	N	P	E	D	S	R	F	F	E	Y	K	S	Y	G	A	G	A	A	V	S	K	D	R	R	Q
Template Known Secondary structure			.	.			.									.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S							G	G	G	S						S		B	S	T	T	S		S	S	S	S	S		B
Template Predicted Secondary structure			.	.			.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300			.	.		.	.	.	.	.	.	.	310														.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions