Job Description P46130 Confidence 93.88% Date Thu Jan 5 12:04:05 GMT 2012 Rank 29 Aligned Residues 139 % Identity 27% Template d1pe9a_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Pectate lyase-like Resolution 1.60

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.												.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.												.																													.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	I	S	E	F	T	S	A	L	.	.	S	A	G	A	E	A	K	I	I	Q	I	.	K	G	T	I	D	I	S	G	G	T	P	Y	T	D	F	A	D	Q	K	A	R	S	Q	I	N	I	P	A	.	.	.	N	T	T	V	I	G	L	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S									.	.	T	T	T	T	S							.		S				T	T	T	T					S								S						S	.	.	.	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.												.																													.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.
Predicted Secondary structure																																															.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	.	.	.	.	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	.	.	.	.	.	.	.	N
Query Conservation																																															.	.	.	.																								.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.																								.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	F	I	N	G	S	L	I	I	D	G	T	D	G	T	N	N	V	I	I	R	N	V	Y	I	Q	T	P	I	D	V	E	P	H	Y	E	K	G	D	G	W	N	A	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S						G	G	G	T								S									S	S					T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	G	R	G	A	V	V	F	D	N	T	E	F	R
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	D	A	M	N	I	T	N	G	A	H	H	V	W	I	D	H	V	T	I	S	D	G	N	F	T	D	D	M	.	.	.	.	.	.	.	.	.	.	.	.	Y	T	T	K	D	G	E	T	Y	V	Q	H	D	G	A	L	D	I	K	R	G	S	D	Y	V	T	I	S	N	S	L	I	D
Template Known Secondary structure				S					T	T								S						T	T	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.					T	T									S					T	T								S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.													.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions