Job Description P46130 Confidence 95.55% Date Thu Jan 5 12:04:05 GMT 2012 Rank 25 Aligned Residues 140 % Identity 21% Template d1pcla_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Pectate lyase-like Resolution 2.20

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																														.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	I	S	D	.	F	K	K	A	L	N	G	T	D	S	S	A	K	I	I	K	V	T	G	P	I	D	I	S	G	G	K	A	Y	T	S	F	D	D	Q	K	A	R	S	Q	I	S	I	P	S	.	.	.	N	T	T	I	I	G	V	G	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S				.					T		S	S			S								S				T	T	T	T					S														S	.	.	.	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																																														.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																.																.	.	.	.	.
Query SS confidence																																																.																.	.	.	.	.
Query Sequence		A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	.	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	.	.	.	.	.	D	S	V	D	A	G	N	H	P	A	V	A	L
Query Conservation																																																.																.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	F	T	N	G	S	L	V	I	K	G	V	K	N	V	I	L	R	N	L	Y	I	E	T	P	V	D	V	A	P	H	Y	E	S	G	D	G	W	N	A	E	W	D	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S						S								S									S	S		B		S	S	S	S	S		B					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		234	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure					.																																													.
Query SS confidence					.																																													.
Query Sequence		R	T	D	.	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	.	E	G	D	V	D	I	V	S	G	R	G	A	V	V	F	D	N	T	E	F	R
Query Conservation					.																																													.
Alig confidence					.																				.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	D	N	S	T	N	V	W	V	D	H	V	T	I	S	D	G	S	F	T	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	T	T	K	D	G	E	K	Y	V	Q	H	D	G	A	L	D	I	K	K	G	S	D	Y	V	T	I	S	Y	S	R	F	E
Template Known Secondary structure					S								S							S	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G					T	T									S					T	T		B						S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.														160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions