Job Description P46130 Confidence 98.03% Date Thu Jan 5 12:04:05 GMT 2012 Rank 14 Aligned Residues 235 % Identity 13% Template d1nhca_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 1.70

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	A	A	V	D	A	A	I	I	K	R	T	N	K	R	Q	Y	I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K
Query Conservation
Alig confidence																	.	.	.									.	.	.																	.	.	.	.																												.
Template Conservation																	.	.	.									.	.	.																	.	.	.	.																												.
Template Sequence		A	S	E	S	I	S	S	C	S	D	V	V	L	S	S	.	.	.	I	E	V	P	A	G	E	T	.	.	.	L	D	L	S	D	A	A	D	G	S	T	I	T	F	E	G	.	.	.	.	T	T	S	F	G	Y	K	E	W	K	G	P	L	I	R	F	G	G	K	D	L	T	V	T	M	A	D	.	G	A	V
Template Known Secondary structure						G	G	G		S						S	.	.	.					T	T			.	.	.				T	T			T	T							S	.	.	.	.									S				S							S							T	.	T
Template Predicted Secondary structure																	.	.	.									.	.	.																	.	.	.	.																												.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G	V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	G	D	G	S	R	W	W	D	S	K	G	T	N	G	G	K	T	K	P	K	F	M	Y	I	H	D	V	E	D	S	T	F	K	G	I	N	I	K	N	T	.	.	.	.	.	.	.	.	.	.	P	V	Q	A	I	S	V	Q	A	T	N	V	H	L	N	D	F	T	I	D	N	S	D	G	D	D	N	G
Template Known Secondary structure						G	G	G	T			S		T	T	T	S	S	S																		S							.	.	.	.	.	.	.	.	.	.	S	S														S						T	T					T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
						252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																						.	.
Query SS confidence		.	.	.	.																																						.	.
Query Sequence		.	.	.	.	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L	V	T	N	S	Y	I	E	G	D	V	D	I	V	S	.	.	G	R	G	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F	A	P	A	T	L	S	N	I	Y	Y	G
Query Conservation		.	.	.	.																																						.	.
Alig confidence		.	.	.	.						.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		G	H	N	T	D	G	F	D	I	.	.	.	.	.	.	.	.	.	.	.	S	E	S	T	G	V	Y	I	S	G	A	T	V	K	N	Q	D	D	C	I	A	I	N	S	G	E	S	I	S	F	T	G	G	T	C	S	.	.	.	.	G	G	H	G	L	S	I	G	S	V	G	G	R	D	D	N	T	V	K	N
Template Known Secondary structure				S			S				.	.	.	.	.	.	.	.	.	.	.		S								S					S	S	S						S	S								S					.	.	.	.	S	S	S								S	S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190												.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	V	N	S	R	F	N	A	F	G	D	G	V	A	Q	L	G	R	S	L	D	V	D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G	F	N
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		V	T	I	S	D	S	T	V	S	N	S	A	N	G	V	R	I	K	T	I	Y	K	E	T	G	D	V	S	E	.	.	I	T	Y	S	N	I	Q	L	S	G	I	T	D
Template Known Secondary structure											S		S									T	T								.	.												S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions