Job Description P46130 Confidence 94.94% Date Thu Jan 5 12:04:05 GMT 2012 Rank 28 Aligned Residues 222 % Identity 12% Template d1k5ca_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 0.96

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	M	P	G	E	Y	Q	G	T	V	Y	V	P	A	A	P	G	G	I	T	L	Y	G	T	G	E	K	P	I	D	V	K	I	G	L	S	L	D	G	G	M	S	P	A	D	W	R	H	D	V	N	P	R	G	K	Y	M	P	G	K	P	A	W	Y	M	Y	D	S	C	Q	S	K	R	S	D	S	I	G
Query Conservation
Alig confidence										.	.	.				.													.	.	.	.																										.	.	.
Template Conservation										.	.	.				.													.	.	.	.																										.	.	.
Template Sequence		F	T	V	P	A	G	N	T	.	.	.	L	V	L	.	N	P	D	K	G	A	T	V	T	M	A	G	.	.	.	.	D	I	T	F	A	K	T	T	L	D	G	P	L	F	T	I	D	G	T	G	I	N	F	V	G	.	.	.	A	D	H	I	F	D	G	N	G	A	L	Y	W	D	G	K	G	T	N	N	G
Template Known Secondary structure						T	T			.	.	.				.				T	T							S	.	.	.	.									S		S		S													.	.	.	T	T							G	G	G	T			S		T	T	T	S	S
Template Predicted Secondary structure										.	.	.				.													.	.	.	.																										.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.				.	.	.		.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	C	S	A	V	F	W	S	Q	N	N	G	L	Q	L	Q	N	L	T	I	E	N	T	L	G	D	S	V	D	A	G	N	H	P	A	V	A	L	R	T	D	G	D	Q	V	Q	I	N	N	V	N	I	L	G	R	Q	N	T	F	F	V	T	N	S	G	V	Q	N	R	L	E	T	N	R	Q	P	R	T	L
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																																							.		.
Template Conservation																												.	.	.	.	.	.	.	.																																							.		.
Template Sequence		T	H	K	P	H	P	F	L	K	I	K	G	S	G	T	Y	K	K	F	E	V	L	N	S	P	A	.	.	.	.	.	.	.	.	Q	A	I	S	V	G	P	T	D	A	H	L	T	L	D	G	I	T	V	D	D	F	A	G	D	T	K	N	L	G	H	N	T	D	G	F	D	V	.	S	.	A	N	N	V	T
Template Known Secondary structure		S						S											S					S		S	S	.	.	.	.	.	.	.	.																S						G	G	G	G	G	G	G				S			S				.		.		S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																																							.		.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.		.	160	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.				340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																																																	.	.	.
Query SS confidence																			.	.																																																	.	.	.
Query Sequence		V	T	N	S	Y	I	E	G	D	V	D	I	V	S	G	R	G	.	.	A	V	V	F	D	N	T	E	F	R	V	V	N	S	R	T	Q	Q	E	A	Y	V	F	A	P	A	T	L	S	N	I	Y	Y	G	F	L	A	V	N	S	R	F	N	A	F	G	D	G	.	.	.	V	A	Q	L	G	R	S	L	D	V
Query Conservation																			.	.																																																	.	.	.
Alig confidence																			.	.											.	.	.	.	.	.																																	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		I	Q	N	C	I	V	K	N	Q	D	D	C	I	A	I	N	D	G	N	N	I	R	F	E	N	N	Q	C	S	.	.	.	.	.	.	G	G	H	G	I	S	I	G	S	I	A	T	G	K	H	V	S	N	V	V	I	K	G	N	T	V	T	R	S	M	Y	G	V	R	I	K	A	Q	R	T	A	T	S	A	S
Template Known Secondary structure				S					S	S	S		S													S					.	.	.	.	.	.	S	S										T	T										S																T	T			S
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	N	T	N	G	Q	V	V	I	R	D	S	A	I	N	E	G
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		V	S	G	.	.	.	.	V	T	Y	D	A	N	T	I	S	G	I
Template Known Secondary structure					.	.	.	.					S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		238	.	240					.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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